Sequence 1: | NP_610315.1 | Gene: | U2A / 35713 | FlyBaseID: | FBgn0033210 | Length: | 265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_172447.1 | Gene: | U2A' / 837505 | AraportID: | AT1G09760 | Length: | 249 | Species: | Arabidopsis thaliana |
Alignment Length: | 242 | Identity: | 109/242 - (45%) |
---|---|---|---|
Similarity: | 153/242 - (63%) | Gaps: | 15/242 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPR 65
Fly 66 LKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPN 130
Fly 131 YREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRK--SKMSAAAAIAAEAGNG 193
Fly 194 KGRGSEGGRLANP--QDMQRIREAIKRASSLAEVERLSQILQSGQLP 238 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U2A | NP_610315.1 | LRR_9 | 1..175 | CDD:258718 | 91/173 (53%) |
leucine-rich repeat | 22..43 | CDD:275380 | 17/20 (85%) | ||
LRR_4 | 46..81 | CDD:289563 | 23/34 (68%) | ||
leucine-rich repeat | 46..65 | CDD:275378 | 12/18 (67%) | ||
leucine-rich repeat | 66..89 | CDD:275378 | 12/22 (55%) | ||
leucine-rich repeat | 90..114 | CDD:275378 | 9/23 (39%) | ||
U2A' | NP_172447.1 | LRR_9 | 1..175 | CDD:373143 | 91/173 (53%) |
leucine-rich repeat | 22..39 | CDD:275378 | 14/16 (88%) | ||
leucine-rich repeat | 40..65 | CDD:275378 | 17/24 (71%) | ||
leucine-rich repeat | 66..89 | CDD:275378 | 12/22 (55%) | ||
leucine-rich repeat | 90..114 | CDD:275378 | 9/23 (39%) | ||
leucine-rich repeat | 115..126 | CDD:275378 | 4/10 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1644 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2325 | |
Inparanoid | 1 | 1.050 | 190 | 1.000 | Inparanoid score | I1384 |
OMA | 1 | 1.010 | - | - | QHG54461 | |
OrthoDB | 1 | 1.010 | - | - | D1447031at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005778 | |
OrthoInspector | 1 | 1.000 | - | - | oto4219 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102567 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10552 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X4167 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |