Protein Alignment U2A and U2A'

DIOPT Version :10

• Sequence 1: NP_610315.1
• Gene: U2A / 35713
• FlyBaseID: FBgn0033210
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_172447.1
• Gene: U2A' / 837505
• AraportID: AT1G09760
• Length: 249
• Species: Arabidopsis thaliana
• Alignment Length: 242
• Identity: 109/242 - (45%)
• Similarity: 153/242 - (63%)
• Gaps: 15/242 - (6%)

  Fly     1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPR 65
            |||||.:||.:|..:.|..:||||||||.|||.|||||||.|||||||||||::.||:|.|:|.|
plant     1 MVKLTADLIWKSPHFFNAIKERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNR 65

  Fly    66 LKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPN 130
            |..||:|||||.||:..|.|.:|.|.|::||.|.|..|.:::||....||:.:.||.|.::.|.|
plant    66 LGTLLINNNRITRINPNLGEFLPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSLLDNNITKKAN 130

  Fly   131 YREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRK--SKMSAAAAIAAEAGNG 193
            ||.|:.:|...||:|||.|||.|:|..|...|.:|:.::.:|::||:  .|:|..|
plant   131 YRLYVIHKLKSLRVLDFIKIKAKERAEAASLFSSKEAEEEVKKVSREEVKKVSETA--------- 186

  Fly   194 KGRGSEGGRLANP--QDMQRIREAIKRASSLAEVERLSQILQSGQLP 238
              ...|..::..|  :.:..|:.||..:.::.|:.||.|.|:.||:|
plant   187 --ENPETPKVVAPTAEQILAIKAAIINSQTIEEIARLEQALKFGQVP 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
U2A	NP_610315.1	LRR_9	1..175	CDD:405295	91/173 (53%)
		leucine-rich repeat	22..43	CDD:275380	17/20 (85%)
		leucine-rich repeat	46..65	CDD:275378	12/18 (67%)
		leucine-rich repeat	66..89	CDD:275378	12/22 (55%)
		leucine-rich repeat	90..114	CDD:275378	9/23 (39%)
U2A'	NP_172447.1	LRR_9	1..175	CDD:405295	91/173 (53%)
		leucine-rich repeat	22..39	CDD:275378	14/16 (88%)
		leucine-rich repeat	40..65	CDD:275378	17/24 (71%)
		leucine-rich repeat	66..89	CDD:275378	12/22 (55%)
		leucine-rich repeat	90..114	CDD:275378	9/23 (39%)
		leucine-rich repeat	115..126	CDD:275378	4/10 (40%)