Protein Alignment U2A and AT3G50690

DIOPT Version :10

• Sequence 1: NP_610315.1
• Gene: U2A / 35713
• FlyBaseID: FBgn0033210
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: NP_190638.1
• Gene: AT3G50690 / 824233
• AraportID: AT3G50690
• Length: 447
• Species: Arabidopsis thaliana
• Alignment Length: 229
• Identity: 50/229 - (21%)
• Similarity: 96/229 - (41%)
• Gaps: 33/229 - (14%)

  Fly    39 ATLDQFDT---IDLSDNDLRKLDNLPHLPRLKCLLLNNNRILRISEGLEEA-VPNLGSIILTGNN 99
            :.|::|..   :.:::..:..|:..|.|..|:.|:|::|||....|.|.|| :.:...:.|:.|.
plant    42 SVLEKFQNLQHLSVANIGVSSLEQFPRLGNLQKLILSDNRITVGLEFLVEAGLDSFCDLDLSNNR 106

  Fly   100 LQELSDLEPLVGFTKLETICLLINPVSTKPNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRT 164
            :|.:.||.||... ||.::.|...||:...:||..:......|:.||....:..:|..:.:....
plant   107 IQFVEDLAPLAEL-KLVSLDLYECPVTRLKDYRSRVFGLIKTLKYLDKTDAEGNERPESDDEDDE 170

  Fly   165 KQGKDVLKEISRKSKMSAAAAIAAEAGNGKGRG---SEGGRLANPQDMQRIREAIKRASSLAEVE 226
            :..:|..:|.....:         :.|:|:..|   :|..|::|...        :|...:.:|:
plant   171 EDEEDEEEEEEGDEE---------DPGSGEIDGDERAEAPRMSNGHS--------ERVDGVVDVD 218

  Fly   227 RLSQILQSGQLPDKFQHEME-AVAQNGAGHNGSG 259
                   ..:..|....|.| |...||..:..:|
plant   219 -------EDEESDAEDDESEQATGVNGTSYRANG 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
U2A	NP_610315.1	LRR_9	1..175	CDD:405295	35/139 (25%)
		leucine-rich repeat	22..43	CDD:275380	1/3 (33%)
		leucine-rich repeat	46..65	CDD:275378	3/21 (14%)
		leucine-rich repeat	66..89	CDD:275378	10/23 (43%)
		leucine-rich repeat	90..114	CDD:275378	7/23 (30%)
AT3G50690	NP_190638.1	PPP1R42	44..161	CDD:455733	32/117 (27%)
		leucine-rich repeat	50..71	CDD:275380	3/20 (15%)
		leucine-rich repeat	72..96	CDD:275380	10/23 (43%)
		leucine-rich repeat	97..120	CDD:275380	7/23 (30%)
		leucine-rich repeat	121..147	CDD:275380	6/25 (24%)