Sequence 1: | NP_610315.1 | Gene: | U2A / 35713 | FlyBaseID: | FBgn0033210 | Length: | 265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017951824.1 | Gene: | lrrc9 / 780204 | XenbaseID: | XB-GENE-1011352 | Length: | 1514 | Species: | Xenopus tropicalis |
Alignment Length: | 289 | Identity: | 72/289 - (24%) |
---|---|---|---|
Similarity: | 112/289 - (38%) | Gaps: | 82/289 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 QSMQYINPCRERELDLRGYKIPQI-ENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNN 74
Fly 75 RILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLI------NPVSTKPNYRE 133
Fly 134 YMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEI----SRKSKMSAAAAIAAEAGN-- 192
Fly 193 --GKGRGSEGGRL----------------------------ANPQDMQRIREAIKRASSLAEVER 227
Fly 228 LSQILQSGQLPDKFQHEMEAVAQNGAGHN 256 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U2A | NP_610315.1 | LRR_9 | 1..175 | CDD:258718 | 49/174 (28%) |
leucine-rich repeat | 22..43 | CDD:275380 | 9/21 (43%) | ||
LRR_4 | 46..81 | CDD:289563 | 14/34 (41%) | ||
leucine-rich repeat | 46..65 | CDD:275378 | 9/18 (50%) | ||
leucine-rich repeat | 66..89 | CDD:275378 | 5/22 (23%) | ||
leucine-rich repeat | 90..114 | CDD:275378 | 4/23 (17%) | ||
lrrc9 | XP_017951824.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1269 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |