Sequence 1: | NP_610315.1 | Gene: | U2A / 35713 | FlyBaseID: | FBgn0033210 | Length: | 265 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003081.2 | Gene: | SNRPA1 / 6627 | HGNCID: | 11152 | Length: | 255 | Species: | Homo sapiens |
Alignment Length: | 264 | Identity: | 136/264 - (51%) |
---|---|---|---|
Similarity: | 178/264 - (67%) | Gaps: | 20/264 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVKLTPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPR 65
Fly 66 LKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPN 130
Fly 131 YREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSK-MSAAAAIAAEAGNGK 194
Fly 195 GRGSEGGRLANPQDMQRIREAIKRASSLAEVERLSQILQSGQLP---------DKFQHEMEA-VA 249
Fly 250 QNGA 253 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U2A | NP_610315.1 | LRR_9 | 1..175 | CDD:258718 | 103/173 (60%) |
leucine-rich repeat | 22..43 | CDD:275380 | 19/20 (95%) | ||
LRR_4 | 46..81 | CDD:289563 | 23/34 (68%) | ||
leucine-rich repeat | 46..65 | CDD:275378 | 11/18 (61%) | ||
leucine-rich repeat | 66..89 | CDD:275378 | 15/22 (68%) | ||
leucine-rich repeat | 90..114 | CDD:275378 | 12/23 (52%) | ||
SNRPA1 | NP_003081.2 | LRR_9 | 1..175 | CDD:405295 | 103/173 (60%) |
LRR 1 | 20..41 | 18/20 (90%) | |||
leucine-rich repeat | 22..43 | CDD:275378 | 19/20 (95%) | ||
LRR 2 | 43..64 | 13/20 (65%) | |||
leucine-rich repeat | 44..65 | CDD:275378 | 13/20 (65%) | ||
LRR 3 | 65..86 | 15/20 (75%) | |||
leucine-rich repeat | 66..89 | CDD:275378 | 15/22 (68%) | ||
LRR 4 | 89..110 | 11/20 (55%) | |||
leucine-rich repeat | 90..114 | CDD:275378 | 12/23 (52%) | ||
leucine-rich repeat | 115..127 | CDD:275378 | 5/11 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 174..201 | 8/35 (23%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 222..255 | 11/32 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165146871 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1644 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2325 | |
Inparanoid | 1 | 1.050 | 245 | 1.000 | Inparanoid score | I3294 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54461 | |
OrthoDB | 1 | 1.010 | - | - | D1447031at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005778 | |
OrthoInspector | 1 | 1.000 | - | - | oto88392 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102567 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10552 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1269 |
SonicParanoid | 1 | 1.000 | - | - | X4167 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.800 |