DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2A and anp32a

DIOPT Version :10

Sequence 1:NP_610315.1 Gene:U2A / 35713 FlyBaseID:FBgn0033210 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001016746.1 Gene:anp32a / 549500 XenbaseID:XB-GENE-982550 Length:244 Species:Xenopus tropicalis


Alignment Length:148 Identity:48/148 - (32%)
Similarity:75/148 - (50%) Gaps:22/148 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TPELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFD------TIDLSDNDLRKLDNLPHL 63
            ||..:.:.:  ::.||.:|        .:||.|   .|:|:      ||::.   |..:.|||.|
 Frog    15 TPADVKELV--LDNCRSKE--------GKIEGL---TDEFEGLEFLSTINVC---LSSIANLPKL 63

  Fly    64 PRLKCLLLNNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTK 128
            .:||.|.|::|.|....|.|.|..|||..:.|:||.:::||.:|||.....|:::.|....|:..
 Frog    64 NKLKKLELSDNNISGGLEVLAEKCPNLTHLNLSGNRIKDLSTIEPLKKLEHLKSLDLFNCEVTNL 128

  Fly   129 PNYREYMAYKFPQLRLLD 146
            .:|||.:....|||..||
 Frog   129 NDYRENVFKLLPQLTYLD 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2ANP_610315.1 LRR_9 1..175 CDD:405295 48/148 (32%)
leucine-rich repeat 22..43 CDD:275380 4/20 (20%)
leucine-rich repeat 46..65 CDD:275378 7/18 (39%)
leucine-rich repeat 66..89 CDD:275378 9/22 (41%)
leucine-rich repeat 90..114 CDD:275378 9/23 (39%)
anp32aNP_001016746.1 LRR_9 <71..146 CDD:405295 26/74 (35%)
leucine-rich repeat 90..114 CDD:275380 9/23 (39%)
leucine-rich repeat 115..141 CDD:275380 6/25 (24%)

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