DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment U2A and lrtomt

DIOPT Version :9

Sequence 1:	NP_610315.1	Gene:	U2A / 35713	FlyBaseID:	FBgn0033210	Length:	265	Species:	Drosophila melanogaster
Sequence 2:	XP_012812100.1	Gene:	lrtomt / 394652	XenbaseID:	XB-GENE-6257736	Length:	211	Species:	Xenopus tropicalis

Alignment Length:	173	Identity:	45/173 - (26%)
Similarity:	80/173 - (46%)	Gaps:	37/173 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 ELINQSMQYINPCRERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLL 71
            :|::|:::..|   ....||:|:. ...|.|.:...|...||||.|||..:|::  ||:.:
Frog    68 KLLSQALRLNN---NTLTDLKGFG-ETAEKLLSDPPQLRWIDLSFNDLSTIDSV--LPKYR---- 122

  Fly    72 NNNRILRISEGLEEAVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPNYREYMA 136
                             ||..:.|..|::::||.::.|.....|:::.|..||:..:..||.|:.
Frog   123 -----------------NLSVLNLHSNSIRQLSQVDKLAALPNLKSLTLHGNPIEGERGYRCYIL 170

  Fly   137 YKFPQLRLLDFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSK 179
            ...|||:.|||..:.::||..|          ||.:.::.|.:
Frog   171 SVLPQLKTLDFSAVTKQDRVTA----------DVWRRMNMKPR 203

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
U2A	NP_610315.1	LRR_9	1..175	CDD:258718	44/167 (26%)
		leucine-rich repeat	22..43	CDD:275380	5/20 (25%)
		LRR_4	46..81	CDD:289563	10/34 (29%)
		leucine-rich repeat	46..65	CDD:275378	9/18 (50%)
		leucine-rich repeat	66..89	CDD:275378	0/22 (0%)
		leucine-rich repeat	90..114	CDD:275378	6/23 (26%)
lrtomt	XP_012812100.1	LRR_RI	<72..153	CDD:238064	26/107 (24%)
		leucine-rich repeat	72..100	CDD:275378	7/31 (23%)
		LRR_8	99..159	CDD:290566	21/82 (26%)
		leucine-rich repeat	101..123	CDD:275378	10/44 (23%)
		leucine-rich repeat	124..148	CDD:275378	6/23 (26%)
		leucine-rich repeat	149..175	CDD:275378	7/25 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1447031at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920