DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2A and CG31076

DIOPT Version :9

Sequence 1:NP_610315.1 Gene:U2A / 35713 FlyBaseID:FBgn0033210 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_733184.2 Gene:CG31076 / 318582 FlyBaseID:FBgn0051076 Length:182 Species:Drosophila melanogaster


Alignment Length:168 Identity:44/168 - (26%)
Similarity:72/168 - (42%) Gaps:30/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNNRI----LRISEGLEEAVPNLG 91
            :|| |.:....|..:.:|||.|.|:.|..|....:|:.|:|::||:    ||.   |...:|.|.
  Fly    21 LPQ-ELVKKHADHVEQLDLSHNCLKDLSWLADFEQLRHLVLDSNRMHEAHLRT---LTCPLPQLE 81

  Fly    92 SIILTGNNLQELSDLEPLVG--FTKLETICLLINPV-----STKP----------NYREYMAYKF 139
            .::|..|...:|.....|:.  |..|:.:.|..||:     ..:|          .|..|:|...
  Fly    82 VLMLNKNEFSDLPTTMRLIRKFFPNLQYLSLHGNPICPDGLELQPFSTYLRYDYEYYSNYIAQSL 146

  Fly   140 PQLRLLDFRKIKQKDRQAAQEFFRTK--QGKDVLKEIS 175
            .:|:.||...::   |....|.|..|  .||.:::..|
  Fly   147 SKLKFLDHGLVQ---RTYKYESFPIKNYNGKQLIQTTS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2ANP_610315.1 LRR_9 1..175 CDD:258718 43/166 (26%)
leucine-rich repeat 22..43 CDD:275380 3/11 (27%)
LRR_4 46..81 CDD:289563 14/38 (37%)
leucine-rich repeat 46..65 CDD:275378 7/18 (39%)
leucine-rich repeat 66..89 CDD:275378 8/26 (31%)
leucine-rich repeat 90..114 CDD:275378 6/25 (24%)
CG31076NP_733184.2 LRR_8 11..65 CDD:290566 15/44 (34%)
leucine-rich repeat 11..32 CDD:275378 3/11 (27%)
leucine-rich repeat 33..54 CDD:275378 7/20 (35%)
leucine-rich repeat 55..79 CDD:275378 8/26 (31%)
leucine-rich repeat 80..106 CDD:275378 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448423
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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