DRSC/TRiP Functional Genomics Resources

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Protein Alignment U2A and CG31076

DIOPT Version :10

Sequence 1:NP_610315.1 Gene:U2A / 35713 FlyBaseID:FBgn0033210 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_733184.2 Gene:CG31076 / 318582 FlyBaseID:FBgn0051076 Length:182 Species:Drosophila melanogaster


Alignment Length:168 Identity:44/168 - (26%)
Similarity:72/168 - (42%) Gaps:30/168 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNNRI----LRISEGLEEAVPNLG 91
            :|| |.:....|..:.:|||.|.|:.|..|....:|:.|:|::||:    ||.   |...:|.|.
  Fly    21 LPQ-ELVKKHADHVEQLDLSHNCLKDLSWLADFEQLRHLVLDSNRMHEAHLRT---LTCPLPQLE 81

  Fly    92 SIILTGNNLQELSDLEPLVG--FTKLETICLLINPV-----STKP----------NYREYMAYKF 139
            .::|..|...:|.....|:.  |..|:.:.|..||:     ..:|          .|..|:|...
  Fly    82 VLMLNKNEFSDLPTTMRLIRKFFPNLQYLSLHGNPICPDGLELQPFSTYLRYDYEYYSNYIAQSL 146

  Fly   140 PQLRLLDFRKIKQKDRQAAQEFFRTK--QGKDVLKEIS 175
            .:|:.||...::   |....|.|..|  .||.:::..|
  Fly   147 SKLKFLDHGLVQ---RTYKYESFPIKNYNGKQLIQTTS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
U2ANP_610315.1 LRR_9 1..175 CDD:405295 43/166 (26%)
leucine-rich repeat 22..43 CDD:275380 3/11 (27%)
leucine-rich repeat 46..65 CDD:275378 7/18 (39%)
leucine-rich repeat 66..89 CDD:275378 8/26 (31%)
leucine-rich repeat 90..114 CDD:275378 6/25 (24%)
CG31076NP_733184.2 LRR <7..>117 CDD:443914 29/99 (29%)
leucine-rich repeat 11..32 CDD:275378 3/11 (27%)
leucine-rich repeat 33..54 CDD:275378 7/20 (35%)
leucine-rich repeat 55..79 CDD:275378 8/26 (31%)
leucine-rich repeat 80..106 CDD:275378 6/25 (24%)

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