Protein Alignment U2A and lrrc72

DIOPT Version :9

• Sequence 1: NP_610315.1
• Gene: U2A / 35713
• FlyBaseID: FBgn0033210
• Length: 265
• Species: Drosophila melanogaster
• Sequence 2: XP_002933350.2
• Gene: lrrc72 / 100495842
• XenbaseID: XB-GENE-22068673
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 206
• Identity: 50/206 - (24%)
• Similarity: 88/206 - (42%)
• Gaps: 42/206 - (20%)

  Fly    21 ERELDLRGYKIPQIENLGATLDQFDTIDLSDNDLRKLDNLPHLPRLKCLLLNNNRILRIS----- 80
            |.:|...|||    .||...     .:.|....|:::.:|.....||.|.||:|:|.||:
 Frog     7 EEQLRKCGYK----RNLDVA-----ELYLGRKGLKEVTDLSRFRMLKFLWLNHNKITRITCLSNN 62

  Fly    81 ----------------EGLEEAVPNLGSIILTGNNLQEL-SDLEPLVGFTKLETICLLINPVSTK 128
                            .|..:.:.:|.:::|..|.|..| :....|.|.|.|:.:.|..||::.:
 Frog    63 WQLSELYLNNNEICDITGCLKHLTSLHTLLLNNNRLANLQATATELKGMTNLQILSLFNNPLAQE 127

  Fly   129 PNYREYMAYKFPQLRLLDFRKIKQKDRQAAQEFFRTKQ---------GK--DVLKEISRKSKMSA 182
            .:||.|:.:..|.::.||.:|:.||:|..|.:.|..::         |:  |.:......||.|.
 Frog   128 SSYRPYIIHYIPSVQRLDRQKVVQKERDNAFKIFNPERTAVIQSLGFGRRTDSVLATKSTSKSSL 192

  Fly   183 AAAIAAEAGNG 193
            ..::.:...:|
 Frog   193 RKSVPSSGNDG 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
U2A	NP_610315.1	LRR_9	1..175	CDD:258718	46/186 (25%)
		leucine-rich repeat	22..43	CDD:275380	6/20 (30%)
		LRR_4	46..81	CDD:289563	12/55 (22%)
		leucine-rich repeat	46..65	CDD:275378	3/18 (17%)
		leucine-rich repeat	66..89	CDD:275378	10/43 (23%)
		leucine-rich repeat	90..114	CDD:275378	7/24 (29%)
lrrc72	XP_002933350.2	leucine-rich repeat	23..42	CDD:275378	3/18 (17%)
		LRR_9	<31..169	CDD:373143	36/137 (26%)
		leucine-rich repeat	43..64	CDD:275378	9/20 (45%)
		leucine-rich repeat	65..113	CDD:275378	8/47 (17%)
		leucine-rich repeat	114..140	CDD:275378	7/25 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1447031at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X4167
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010