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Protein Alignment U2A and LOC100331330

DIOPT Version :10

Sequence 1:	NP_610315.1	Gene:	U2A / 35713	FlyBaseID:	FBgn0033210	Length:	265	Species:	Drosophila melanogaster
Sequence 2:	XP_068078894.1	Gene:	LOC100331330 / 100331330	-ID:	-	Length:	202	Species:	Danio rerio

Alignment Length:	164	Identity:	37/164 - (22%)
Similarity:	69/164 - (42%)	Gaps:	45/164 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    42 DQFDTIDLSDN----------DLRKLDNL-------------PHLPRLKCLLLNNNRILRISEGL 83
            |..:.:|||.|          .|.||..|             |.:|.|..|.:|.|:|..:...:
Zfish    54 DSLEVLDLSYNLLEENPALLGGLEKLSTLILDCNNYSAHVKFPFMPSLTTLWINKNKISNLPIIV 118

  Fly    84 EE---AVPNLGSIILTGNNLQELSDLEPLVGFTKLETICLLINPVSTKPNYREYMAYKFPQLRLL 145
            ||   ..||:..:.:..|        |....:....::...|       :||:|:..:...|.:|
Zfish   119 EEICCKFPNIKILSMMNN--------EAAPSYFNGGSLTQYI-------DYRQYVISQILGLEVL 168

  Fly   146 DFRKIKQKDRQAAQEFFRTKQGKDVLKEISRKSK 179
            |..::::|:|:.|::.:|.::    ::|.||:.|
Zfish   169 DDTEVQEKEREQARKTYRLQR----IREGSRRRK 198

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.