DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN4-p62 and dnc-4

DIOPT Version :10

Sequence 1:NP_610311.1 Gene:DCTN4-p62 / 35709 FlyBaseID:FBgn0033206 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_501344.1 Gene:dnc-4 / 177600 WormBaseID:WBGene00016124 Length:413 Species:Caenorhabditis elegans


Alignment Length:470 Identity:123/470 - (26%)
Similarity:186/470 - (39%) Gaps:122/470 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MQPSPVKYACSCGILNPINTLFFCRHCPKLRCGFCVTHEIESHFCSNCLENIPSTEARHKKNCCA 68
            :|.|.:||.|:||....:..|.|||:|.|::|..|...|:::.||..|||.....|||.||:.||
 Worm     5 LQYSRIKYECTCGKFRTLPDLVFCRYCFKIKCDDCSLGEVDNIFCPRCLEPSSVPEARLKKHKCA 69

  Fly    69 NCFDCPCCQHTLSARASTVPVVRKSEEAKEPKDGDSKGEATPPVPASSKPSAVPTTKKMYYLSCL 133
            :|.|||.|.:.||||                                       |.....||.|.
 Worm    70 SCNDCPKCANVLSAR---------------------------------------TENDNVYLVCQ 95

  Fly   134 SCRWTTRDVGIPDQGVATGTWPDNECLYQARFNALVEYFQAVVLQEKQEKLEFMRRKAPKQHKFP 198
            .|||::|:....|| ..|.:||..|       |.||.....|....|  :||.: ..|||..|  
 Worm    96 YCRWSSREANQEDQ-ENTKSWPTKE-------NPLVNQLGEVTAYMK--RLELI-ENAPKDLK-- 147

  Fly   199 SLTDRTG--LTVSLIRRQIGWNDKAPKAKAVITP------AEATAEVEGLPENIFTEPLNLRNVT 255
              ..::|  .|...::.:.|:.....|.|..:.|      |.|..|...|.:.|.....:||.:.
 Worm   148 --KGKSGKAWTAFHLKDKFGFQQMVDKRKKALAPEMNPVDAHAPTEAPTLEDEIKERTDDLRTLD 210

  Fly   256 TITQRHSQPADQPTAVGSLYPQRRSLWIKRSLRCRQCEHNLIKPEYHPTSIKYRIQHFASYHVPE 320
            .|..:......:|     |.|.:..|..:..:||.:||..|||.::..|:.|::|..||...||:
 Worm   211 QIIMQPLINISEP-----LLPVQVPLAGRVQVRCDECERTLIKRDFGVTTFKFKISSFARQFVPD 270

  Fly   321 VVMVRCEQPLVAGKSNAILLKLTNPTIYDMTIRLLTASPPEDPQLSTEATRVAKEEPISSSPLLK 385
            :.|.|....|..|:::.:.|.:||                                 :|||    
 Worm   271 IRMSRPVDDLKVGETSHVFLSITN---------------------------------LSSS---- 298

  Fly   386 AVGITLSRQ--NSTREVKRDVIDISNAEIVPLESEFVLNQRDDSKEFDEDVQ-LSTEEPKFIVWR 447
            |:.:|::.|  |...:...|.|.:    ::|           .|:..|.... :..::...||:|
 Worm   299 AMDLTIAPQSGNGFIQCSSDPIQL----LLP-----------SSRASDTAAPGVHADQSDVIVFR 348

  Fly   448 KGNKVLLRLQFTPAE 462
            :.|:|.|||...|.|
 Worm   349 QHNRVGLRLDVIPTE 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN4-p62NP_610311.1 Dynactin_p62 20..363 CDD:428497 94/350 (27%)
dnc-4NP_501344.1 Dynactin_p62 25..>103 CDD:428497 37/116 (32%)

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