DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rdh1 and AT5G53100

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_200122.1 Gene:AT5G53100 / 835390 AraportID:AT5G53100 Length:364 Species:Arabidopsis thaliana


Alignment Length:311 Identity:102/311 - (32%)
Similarity:169/311 - (54%) Gaps:39/311 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQ----------NIFSREL 101
            ||||:.:|||.|||.::|..|..|.:|.|::    ||..::|::...:          ||.:.||
plant    48 IVTGSTSGIGSETARQLAEAGAHVVMAVRNI----KAAHELIQQWQTKWSASGEGLPLNIQAMEL 108

  Fly   102 DLSSLDSIRKFVDGFKKEQPKLHVLINNAGV--MRCPKTLTKDGYELQLGVNHIGHFLLTNLLLD 164
            ||.||||:.:|.:.:......|||||||||:  |...:..::||||..:.|||:...||:.|||.
plant   109 DLLSLDSVVRFSNAWNARLAPLHVLINNAGMFAMGGAQKFSEDGYEQHMQVNHLAPALLSLLLLP 173

  Fly   165 VLKNSAPSRIVVVSSLAHARGSINVADLN---SEKSYDEGLAYSQSKLANVLFTRELAKRLE-GS 225
            .|..::.|||:.|:|:.|..|.::..|:|   .::.:....|||.||||.|:|...|.|:|. .:
plant   174 SLIRASRSRIINVNSVMHYVGFVDPNDMNFVSGKRKFSSLSAYSSSKLAQVMFNNVLLKKLPLET 238

  Fly   226 GVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPEL------ 284
            |::|..|.||||.|.:.|:    ...||:.....:.: .:.:|:.|.::|:::|.||::      
plant   239 GISVVCLSPGVVQTNITRD----LPRLVQDLYSALPY-FIFSPQEGCRSSLFSATDPQIPNHYQK 298

  Fly   285 -----KNISGLYFS-DCKPKPVASGALDDKVAKFLWAESEKWTGL--DKLE 327
                 |::..|:.| :||....:..|.:.:.|..:|.::.:..||  |.:|
plant   299 LKTNEKSVCTLFISLNCKLTNCSEEAQNVETANRVWEKTLELIGLPSDTVE 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 98/297 (33%)
AT5G53100NP_200122.1 Rossmann-fold NAD(P)(+)-binding proteins 48..334 CDD:473865 97/294 (33%)

Return to query results.
Submit another query.