DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2064 and AT5G50130

DIOPT Version :9

Sequence 1:NP_610310.2 Gene:CG2064 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_568721.1 Gene:AT5G50130 / 835078 AraportID:AT5G50130 Length:339 Species:Arabidopsis thaliana


Alignment Length:288 Identity:104/288 - (36%)
Similarity:155/288 - (53%) Gaps:27/288 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRK 111
            |:||..:|||.|||..:|:||..|.:|.|||.:.|..::.||:|....:|...|:|||||.|:.:
plant    40 IITGGTSGIGAETARVLAKRGVRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVAR 104

  Fly   112 FVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVL-----KNSAP 171
            |...|..:...|::|||||||.......:::..||....|.:||:|||.:|::.:     |:...
plant   105 FCSQFLSQDLPLNILINNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIE 169

  Fly   172 SRIVVVSSLAHARGSINVAD---------LNSEKSYDEGLAYSQSKLANVLFTRELAKRLE--GS 225
            .||:.:||:.|     |...         |:....|:...||:|||||.:|..:.|:|:|:  .:
plant   170 GRIINLSSVIH-----NWVKPDCFSFPKLLHPISRYNGTRAYAQSKLATILHAKALSKQLKDRNA 229

  Fly   226 GVTVNALHPGVVDTELAR-NWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPELKNISG 289
            .||:||:|||:|.|.:.| :...|..:|.....|     |||:...||.|:.|.||..|.|.:||
plant   230 NVTINAVHPGIVKTGIIRAHKGLFTDSLFLIASK-----LLKSISQGAATTCYVALSNETKGLSG 289

  Fly   290 LYFSDCKPKPVASGALDDKVAKFLWAES 317
            .||:||.....:..|.|:.||..|..:|
plant   290 KYFADCNETNCSDLANDEYVALKLCTQS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2064NP_610310.2 PRK06197 40..322 CDD:235737 104/288 (36%)
NADB_Rossmann 43..317 CDD:304358 103/286 (36%)
AT5G50130NP_568721.1 retinol-DH_like_SDR_c_like 38..313 CDD:212492 102/282 (36%)
adh_short 38..245 CDD:278532 77/209 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D921996at2759
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - mtm1091
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.730

Return to query results.
Submit another query.