Protein Alignment Rdh1 and AT4G11410

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_192880.1
• Gene: AT4G11410 / 826745
• AraportID: AT4G11410
• Length: 317
• Species: Arabidopsis thaliana
• Alignment Length: 325
• Identity: 127/325 - (39%)
• Similarity: 170/325 - (52%)
• Gaps: 28/325 - (8%)

  Fly    14 MWP----ATIGVGIYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLAC 74
            |||    ...|.......|     :.|...|.||...|||||::|||:||...:|.||..|.:|.
plant     1 MWPFWWKGASGFSARSTAE-----EVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAV 60

  Fly    75 RDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTL 139
            |:.:...:.|..|:||.....|...:|||||:.|:|.|...::.....|::||||||:|.||..|
plant    61 RNTDSGNQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLL 125

  Fly   140 TKDGYELQLGVNHIGHFLLTNLLLDVLKNSA-----PSRIVVVSSLAHA---RGSINVADLNSEK 196
            :.|..|||...||:||||||||||:.:|.:|     ..|||:|||..|.   |..:....:|.|.
plant   126 SSDNIELQFATNHLGHFLLTNLLLERMKKTASESNREGRIVIVSSEGHRFAYREGVQFDKINDEA 190

  Fly   197 SYDEGLAYSQSKLANVLFTRELAK--RLEGSGVTVNALHPGVVDTELARNWAFFQT--NLVKFFL 257
            .|:...||.||||.|:|...|||:  :.:|..:|.|:||||.:.|.|.|..:|..|  |.|..:
plant   191 RYNTLQAYGQSKLGNILHATELARLFKEQGVNITANSLHPGSIMTNLLRYHSFINTIGNAVGKY- 254

  Fly   258 KPMIWPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTG 322
                  :||:...||.|:.||||.|:.|.:||.|..|.......|...|..:||.||..|.:.||
plant   255 ------VLKSIPQGAATTCYAALHPQAKGVSGEYLMDNNISDPNSQGKDKDLAKKLWEFSLRLTG 313

  Fly   323  322
            plant   314  313

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	116/285 (41%)
AT4G11410	NP_192880.1	retinol-DH_like_SDR_c_like	29..305	CDD:212492	114/282 (40%)