DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and AT4G09750

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_192713.1 Gene:AT4G09750 / 826563 AraportID:AT4G09750 Length:322 Species:Arabidopsis thaliana


Alignment Length:301 Identity:90/301 - (29%)
Similarity:156/301 - (51%) Gaps:31/301 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WPATIGVGIYFLKEYMQGG------KFTKDTDE---TGKVFIVTGANTGIGKETALEIARRGGTV 70
            |.:| ..|:|....:.:.|      ||..:..:   .||..:|||||:|||...|..:|.||.||
plant     7 WRST-AFGVYGYMNFTKSGFLDHSKKFKPEDMQLQIEGKNCVVTGANSGIGFAAAEGLASRGATV 70

  Fly    71 YLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRC 135
            |:.||:..|.::|...|...|.|||::....||||::.|:.|...|..:...:|||:||||::..
plant    71 YMVCRNKERGQEALSKIQTSTGNQNVYLEVCDLSSVNEIKSFASSFASKDVPVHVLVNNAGLLEN 135

  Fly   136 PKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAP-SRIVVVSSLAHARGSINVADLNSE---- 195
            .:|.|.:|:||...||.:|.:.:|.|:|.:|:.:.| ::::.|:|     |.:..:.|.::    
plant   136 KRTTTPEGFELSFAVNVLGTYTMTELMLPLLEKATPDAKVITVAS-----GGMYTSPLTTDLQFS 195

  Fly   196 -KSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTE-LARNWAFFQTNLVKFFLK 258
             :.:|....|:::|...|..|.:.|.:.:..|:...::|||..:|. :|::...|..:..     
plant   196 GEKFDGVEQYARNKRIQVALTEKWADKYKNKGIGFYSMHPGWAETPGVAKSLPSFSESFA----- 255

  Fly   259 PMIWPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKP 299
                ..|:|.:.||.|.::.||.|:.|.:||.::.|....|
plant   256 ----GKLRTSEQGADTIVWLALQPKEKLVSGAFYFDRAEAP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 83/264 (31%)
AT4G09750NP_192713.1 Rossmann-fold NAD(P)(+)-binding proteins 43..298 CDD:473865 83/264 (31%)

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