DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and zgc:153441

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_073787220.1 Gene:zgc:153441 / 751745 ZFINID:ZDB-GENE-060825-39 Length:338 Species:Danio rerio


Alignment Length:304 Identity:154/304 - (50%)
Similarity:201/304 - (66%) Gaps:6/304 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GIYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKD 86
            |:..|:.::.||.........||..::||:|||||||||.::||||..|.:||||:::.|||..:
Zfish    33 GLLLLRRWISGGVCRCRVRLDGKTVVITGSNTGIGKETARDMARRGARVVMACRDLSKAEKAAAE 97

  Fly    87 IIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVN 151
            |.:.|.|.:|..|.|:|:||.|:|:|...:...:.:|.:||||||||.|||:||:||||.|..||
Zfish    98 IRRSTGNADIVVRHLNLASLHSVRQFAHQYTATEDRLDILINNAGVMMCPKSLTEDGYETQFAVN 162

  Fly   152 HIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKS-YDEGLAYSQSKLANVLFT 215
            |:||||||.||||:||.|:|||::.|||:.|..|.|:..|||..|: ||..::|.||||||:|||
Zfish   163 HLGHFLLTVLLLDMLKKSSPSRVINVSSITHKGGKIHFDDLNFNKAPYDSLVSYRQSKLANLLFT 227

  Fly   216 RELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTN--LVKFFLKPMIWPLLKTPKSGAQTSIYA 278
            ||||:|::||||:|.:|||||:.|||.|   :.||.  |:...|......|:|||..|||||||.
Zfish   228 RELARRIKGSGVSVFSLHPGVIRTELGR---YVQTRHPLLSGLLSIPALLLMKTPYQGAQTSIYC 289

  Fly   279 ALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTG 322
            |....|:..||.|||||..|..|....||..|..||..|.|..|
Zfish   290 ATADGLEIHSGCYFSDCALKEPAPEGKDDLAALRLWEISAKLVG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 147/276 (53%)
zgc:153441XP_073787220.1 None

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