DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and BDH1

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_011511369.1 Gene:BDH1 / 622 HGNCID:1027 Length:347 Species:Homo sapiens


Alignment Length:283 Identity:59/283 - (20%)
Similarity:107/283 - (37%) Gaps:70/283 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDS 108
            |..:|||.::|.|...|..:..:|..|:..|...::.....|: :...|:..:.:.:|::.|.:.
Human    60 KAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKE-LDSLNSDRLRTVQLNVCSSEE 123

  Fly   109 IRKFVD----GFKKEQPKLHVLINNAGVMRCPKT--LTKDGYELQLGVNHIGHFLLTNLLLDVLK 167
            :.|.|:    ..|..:..:..|:||||:....:.  .:.:.|:....||..|...:|...|.:::
Human   124 VEKVVEIVRSSLKDPEKGMWGLVNNAGISTFGEVEFTSLETYKQVAEVNLWGTVRMTKSFLPLIR 188

  Fly   168 NSAPSRIVVVSSLA-----HARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGV 227
            . |..|:|.:||:.     .||....:.....| ::.:.|.|....|                ||
Human   189 R-AKGRVVNISSMLGRMANPARSPYCITKFGVE-AFSDCLRYEMYPL----------------GV 235

  Fly   228 TVNALHPG--VVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPEL--KNIS 288
            .|:.:.||  :..|.|      :....::...|.| |..|                ||:  |:..
Human   236 KVSVVEPGNFIAATSL------YSPESIQAIAKKM-WEEL----------------PEVVRKDYG 277

  Fly   289 GLYFSDCKPKPVASGALDDKVAK 311
            ..||             |:|:||
Human   278 KKYF-------------DEKIAK 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 59/283 (21%)
BDH1XP_011511369.1 type2_17beta_HSD-like_SDR_c 60..345 CDD:187665 59/283 (21%)

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