DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and LOC5667498

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_001689351.3 Gene:LOC5667498 / 5667498 VectorBaseID:AGAMI1_003372 Length:338 Species:Anopheles gambiae


Alignment Length:339 Identity:101/339 - (29%)
Similarity:161/339 - (47%) Gaps:40/339 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CIFIDCLLSPLIMWPATIGVGIYFLKEYMQGGKF-TKDTDETGKVFIVTGANTGIGKETALEIAR 65
            |:|..            :|...|:::.|..|..: :|...:.|::.::||||:|||..|.||:|.
Mosquito     8 CVFFG------------LGSVAYYVRWYYIGRLYESKRKFQNGELIVLTGANSGIGWATLLELAD 60

  Fly    66 RGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNA 130
            ||..:.|..|.....:..|..::.:.....|.:..|.|.||.|:.:|.:..:.....|:.|||||
Mosquito    61 RGCHLALGVRCPTVGQTIRDRVLHQCPCATIDTFVLKLESLASVVEFSENVRNLNKPLYALINNA 125

  Fly   131 GVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLK-NSAPSRIVVVSSLAHARGSINVADL-- 192
            ||...|.::|:|..|....||::.|||||..||..|| :.:.||||.|.|.||.    :||::  
Mosquito   126 GVFYVPPSVTEDKLEYLYQVNYLAHFLLTLRLLPALKQHPSDSRIVNVVSQAHR----SVAEIPP 186

  Fly   193 --------NSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGV---TVNALHPGVVDTELARNWA 246
                    ..:.|.:...||:.||...|.|:..|::.|..|..   ||:.:.||.|:|.:.|::.
Mosquito   187 NDRFGGPPYPDTSANRFRAYAYSKFCLVQFSYRLSQLLAASSTNIPTVHCIDPGNVETPIYRHFP 251

  Fly   247 FFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPE-----LKNISGLYFSDC-KPKPVASGAL 305
            ......:.:..||:...|:|||..|||..:||.|..:     ::...|...||. :..|:..   
Mosquito   252 LLANRALFWLQKPLRILLIKTPHEGAQGILYAVLSEKKPPFYVRRFWGRESSDYDEINPLVR--- 313

  Fly   306 DDKVAKFLWAESEK 319
            .:.:|..||..|.:
Mosquito   314 KEALADTLWKRSRQ 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 93/293 (32%)
LOC5667498XP_001689351.3 None

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