Protein Alignment Rdh1 and rdh20

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: XP_683600.5
• Gene: rdh20 / 555864
• ZFINID: ZDB-GENE-131127-122
• Length: 316
• Species: Danio rerio
• Alignment Length: 212
• Identity: 55/212 - (25%)
• Similarity: 91/212 - (42%)
• Gaps: 26/212 - (12%)

  Fly    36 TKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIK--ETNNQNIFS 98
            ||..|  |::.::||:...:|:..|||..:.|..|.|  .|:|  .:|.:|..|  ........:
Zfish    31 TKPID--GELVLITGSGGALGRLFALEFTKHGAEVVL--WDVN--GEANEDTAKLVRARGGQAHA 89

  Fly    99 RELDLSSLDSIRKFVDGFKKEQPK-LHVLINNAGVMRCPKTLTKDGYELQ--LGVNHIGHFLLTN 160
            ..:|::..:.:.:..|..::|..: :..|:|||||:...:.|....|.|:  |.||....|....
Zfish    90 YTVDVTKREEVYRTADLVREEVGRDVTYLVNNAGVVAGERLLDCPDYLLERTLKVNCHALFWTVK 154

  Fly   161 LLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRL--- 222
            ..|..:|:.....|:.::|:.....:..|.|            |..||.|.|.|...||..|
Zfish   155 AFLPQMKDKNHGHIITIASVLGLFSTACVED------------YCASKFAAVGFHESLAHELLTE 207

  Fly   223 EGSGVTVNALHPGVVDT 239
            :..||....:.|.:|||
Zfish   208 DLDGVKTTLVCPYIVDT 224

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	52/205 (25%)
rdh20	XP_683600.5	17beta-HSDXI-like_SDR_c	38..282	CDD:187598	51/203 (25%)