DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and rdh14

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001017231.1 Gene:rdh14 / 549985 XenbaseID:XB-GENE-1018384 Length:323 Species:Xenopus tropicalis


Alignment Length:329 Identity:162/329 - (49%)
Similarity:210/329 - (63%) Gaps:23/329 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SPLIMWPATIGVG---IYFLKEYMQ-----GGKFTKDTDETGKVFIVTGANTGIGKETALEIARR 66
            ||.:|..|.:.:|   |..::..:.     ||....    .||..|:||||.||||.||.|:.::
 Frog     5 SPALMVAAAVALGGGLILVVRRLLSNSVRAGGSGLM----RGKTVIITGANCGIGKATAAELVKQ 65

  Fly    67 GGTVYLACRDMNRCEKARKDIIKETNNQ-NIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNA 130
            ...|.|||||..|.|:|..::.:|...: .|..::|||.||.|:|:|.....||:|:|.||||||
 Frog    66 EARVILACRDQGRAEEAAAELRREAGERGEIVIKQLDLGSLQSVRRFCQEVLKEEPRLDVLINNA 130

  Fly   131 GVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSE 195
            ||.:||.|.|:||:|:|.||||:||||||:.||.:||:|||||||||||..:..|.||..|||||
 Frog   131 GVFQCPYTKTEDGFEMQFGVNHLGHFLLTHHLLGLLKSSAPSRIVVVSSKLYKYGEINFDDLNSE 195

  Fly   196 KSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPM 260
            |||.....||:|||||:|||||||.||||:||||||||||:|.|.|.|:     .| :...:||:
 Frog   196 KSYSRSFGYSRSKLANILFTRELASRLEGTGVTVNALHPGIVRTNLGRH-----IN-IPILIKPL 254

  Fly   261 I----WPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWT 321
            .    |...|:|:.|||||||.|..||::.:||.||.:.|.:.:...|:||.||:.||..||...
 Frog   255 FNVVSWAFFKSPEEGAQTSIYLASSPEVEGVSGSYFGNSKEEELLPKAMDDLVARKLWDISEVMV 319

  Fly   322 GLDK 325
            ||.|
 Frog   320 GLIK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 149/278 (54%)
rdh14NP_001017231.1 Rossmann-fold NAD(P)(+)-binding proteins 42..315 CDD:473865 149/278 (54%)

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