DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2064 and rdh14

DIOPT Version :9

Sequence 1:NP_610310.2 Gene:CG2064 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001017231.1 Gene:rdh14 / 549985 XenbaseID:XB-GENE-1018384 Length:323 Species:Xenopus tropicalis


Alignment Length:329 Identity:162/329 - (49%)
Similarity:210/329 - (63%) Gaps:23/329 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SPLIMWPATIGVG---IYFLKEYMQ-----GGKFTKDTDETGKVFIVTGANTGIGKETALEIARR 66
            ||.:|..|.:.:|   |..::..:.     ||....    .||..|:||||.||||.||.|:.::
 Frog     5 SPALMVAAAVALGGGLILVVRRLLSNSVRAGGSGLM----RGKTVIITGANCGIGKATAAELVKQ 65

  Fly    67 GGTVYLACRDMNRCEKARKDIIKETNNQ-NIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNA 130
            ...|.|||||..|.|:|..::.:|...: .|..::|||.||.|:|:|.....||:|:|.||||||
 Frog    66 EARVILACRDQGRAEEAAAELRREAGERGEIVIKQLDLGSLQSVRRFCQEVLKEEPRLDVLINNA 130

  Fly   131 GVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSE 195
            ||.:||.|.|:||:|:|.||||:||||||:.||.:||:|||||||||||..:..|.||..|||||
 Frog   131 GVFQCPYTKTEDGFEMQFGVNHLGHFLLTHHLLGLLKSSAPSRIVVVSSKLYKYGEINFDDLNSE 195

  Fly   196 KSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPM 260
            |||.....||:|||||:|||||||.||||:||||||||||:|.|.|.|:     .| :...:||:
 Frog   196 KSYSRSFGYSRSKLANILFTRELASRLEGTGVTVNALHPGIVRTNLGRH-----IN-IPILIKPL 254

  Fly   261 I----WPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWT 321
            .    |...|:|:.|||||||.|..||::.:||.||.:.|.:.:...|:||.||:.||..||...
 Frog   255 FNVVSWAFFKSPEEGAQTSIYLASSPEVEGVSGSYFGNSKEEELLPKAMDDLVARKLWDISEVMV 319

  Fly   322 GLDK 325
            ||.|
 Frog   320 GLIK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2064NP_610310.2 PRK06197 40..322 CDD:235737 151/286 (53%)
NADB_Rossmann 43..317 CDD:304358 149/278 (54%)
rdh14NP_001017231.1 NADB_Rossmann 42..315 CDD:389744 149/278 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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