DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and dhrs13a.2

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001004641.1 Gene:dhrs13a.2 / 447903 ZFINID:ZDB-GENE-040912-69 Length:318 Species:Danio rerio


Alignment Length:308 Identity:137/308 - (44%)
Similarity:192/308 - (62%) Gaps:13/308 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDI 87
            :..::...:..|.....|.|||..|:||.||||||.|||::|.||..|.||||:..:.|.|..||
Zfish    16 VVLVETLFKKSKCNGSADVTGKTAIITGGNTGIGKATALDLAGRGMRVILACRNQKKAEAAINDI 80

  Fly    88 IKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNH 152
            .|.|.:..:...||||.||.|:|.|.:.|.|.:.:|.:||||||::...:  |:||:.::.||||
Zfish    81 KKATGSDEVLFMELDLGSLKSVRAFAETFLKSESRLDLLINNAGLVADGR--TEDGFGIEFGVNH 143

  Fly   153 IGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEG-------LAYSQSKLA 210
            :||||||.||||.||.|..:|::.:||:|:..|.|:...|.:.|....|       .||..|||.
Zfish   144 LGHFLLTCLLLDRLKESPAARVITLSSMAYRWGRIDFDSLITTKDLGSGRYSWQFFQAYCNSKLC 208

  Fly   211 NVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTS 275
            |||||.||||||:|:.||..::|||||.|||:||.:.:|    |.|::|:...|...||:||||:
Zfish   209 NVLFTHELAKRLKGTSVTCYSVHPGVVKTELSRNVSLWQ----KVFIEPVARLLFLDPKTGAQTT 269

  Fly   276 IYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTGL 323
            ::.|:...:::.||.|||.|..:.|.:.|.||.||:.||..||:.:||
Zfish   270 LHCAVQEGIEHFSGRYFSCCAVEEVGAKAKDDAVARKLWQISERLSGL 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 130/280 (46%)
dhrs13a.2NP_001004641.1 Rossmann-fold NAD(P)(+)-binding proteins 36..311 CDD:473865 130/280 (46%)

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