DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and dhrs13

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_989311.1 Gene:dhrs13 / 394935 XenbaseID:XB-GENE-1006231 Length:314 Species:Xenopus tropicalis


Alignment Length:318 Identity:148/318 - (46%)
Similarity:194/318 - (61%) Gaps:16/318 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IMWPATIGVGIYFLKEY--MQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACR 75
            :|....:|:|.|.|..:  ::|.:...|....||..||||||.||||.|||::|:||..|.||||
 Frog     4 VMLVVGLGIGAYILIYFNLIRGRQCRSDASLKGKTVIVTGANVGIGKMTALDMAKRGARVILACR 68

  Fly    76 DMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLT 140
            .....|.|..||.|.:.|..:...:|||:||:|:|.|...|...:|:|.:||||||:....|  |
 Frog    69 VKETGEAAAYDIRKLSGNNQVVFMKLDLASLESVRSFCRAFLSSEPRLDILINNAGLSGFGK--T 131

  Fly   141 KDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSI--NVADLNSEKSYDEGLA 203
            .:||.:..||||:||||||:||||.||.|.||||||::|.||..|.|  |...:.||...|...:
 Frog   132 AEGYNIVFGVNHLGHFLLTSLLLDRLKQSTPSRIVVLASYAHEWGKIDFNKISVPSEHVKDTLQS 196

  Fly   204 YSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELAR---NWAFFQTNLVKFFLKPMIWPLL 265
            |..|||.||||.||||.||:|:.||..::|||.|.|.|||   :|       :|..::|:.|..|
 Frog   197 YCDSKLCNVLFARELANRLQGTSVTCYSVHPGTVHTNLARSLPSW-------IKVLIEPVSWLFL 254

  Fly   266 KTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTGL 323
            :||.:|||||||.|:...::..||.||.:|:.:.|...|.||.|||.||..||:.|||
 Frog   255 RTPMNGAQTSIYCAVQEGIEMYSGRYFDNCQVRQVKPHARDDAVAKKLWEVSERMTGL 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 136/278 (49%)
dhrs13NP_989311.1 Rossmann-fold NAD(P)(+)-binding proteins 36..306 CDD:473865 136/278 (49%)

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