DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and Dhrs4

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_647946.1 Gene:Dhrs4 / 38598 FlyBaseID:FBgn0035588 Length:317 Species:Drosophila melanogaster


Alignment Length:211 Identity:61/211 - (28%)
Similarity:97/211 - (45%) Gaps:31/211 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLD 107
            |||.:||.:..|||...|..:|..|..|.::.|.....:.|..::.|  .|.|:...:..:|..:
  Fly    71 GKVAVVTASTDGIGFAIAKRLAEDGAAVVISSRKQKNVDSALAELRK--LNLNVHGLKCHVSEPE 133

  Fly   108 SIRKFVDGFKKEQPKLHVLINNA-------GVMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDV 165
            ..::..:....:..||::|::||       ||:.|.:.:    ::....||....:||....|.:
  Fly   134 DRKQLFEETISKFGKLNILVSNAATNPAVGGVLECDEKV----WDKIFDVNVKSSYLLAKEALPL 194

  Fly   166 LKNSAPSRIVVVSSLAHARGSINVADLNSEKSYD--EGL-AYSQSKLANVLFTRELAKRLEGSGV 227
            |:....|.||.|||:|               .||  |.| |||.||.|.:..|:..||.|...|:
  Fly   195 LRQQKNSSIVFVSSIA---------------GYDAFELLGAYSVSKTALIGLTKAAAKDLAPEGI 244

  Fly   228 TVNALHPGVVDTELAR 243
            .||.|.|||:.|:.::
  Fly   245 RVNCLAPGVIRTKFSK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 61/211 (29%)
Dhrs4NP_647946.1 Rossmann-fold NAD(P)(+)-binding proteins 67..317 CDD:473865 61/211 (29%)

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