Protein Alignment Rdh1 and cbr1

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_919387.1
• Gene: cbr1 / 373866
• ZFINID: ZDB-GENE-030902-2
• Length: 276
• Species: Danio rerio
• Alignment Length: 294
• Identity: 87/294 - (29%)
• Similarity: 123/294 - (41%)
• Gaps: 61/294 - (20%)

  Fly    44 KVFIVTGANTGIGKETALEIARR-GGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLD 107
            ||.:|||||.|||......:.:. .|.|||:.||:.| ..|..|.:|:.....:| .:||::..:
Zfish     5 KVALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGR-GTAAVDSLKKEGLHPLF-HQLDINDPN 67

  Fly   108 SIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDG--YELQLGVNHIGHFLLTNLLLDVLKNSA 170
            |:|...|.|:::...|.|||||||:.......|..|  .::.|..|......:.|:.|.::|..
Zfish    68 SVRTARDFFQEKYGGLDVLINNAGIAFKMADTTPFGTQADVTLKTNFFATRDMCNVFLPIIKPG- 131

  Fly   171 PSRIVVVS----SLAHARGS-----------INVADLN---------------SEKSYDEGLAYS 205
             .|:|.||    |:|..|.|           |...:||               ||:.: ...||.
Zfish   132 -GRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERFVREAQEGVHSERGW-PSTAYG 194

  Fly   206 QSKLANVLFT----RELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLK 266
            .||......|    |.|.|...|.|:..||..||.|.|::|...|                  .|
Zfish   195 ISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDMAGPNA------------------TK 241

  Fly   267 TPKSGAQTSIYAALDPE-LKNISGLYFSDCKPKP 299
            :|..||.|.:|.||.|. .|...|.:.|:.|.:|
Zfish   242 SPDEGAITPVYLALLPAGAKEPHGQFVSEMKVQP 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	87/294 (30%)
cbr1	NP_919387.1	carb_red_PTCR-like_SDR_c	5..276	CDD:187585	87/294 (30%)