DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rdh1 and CG11200

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_611471.1 Gene:CG11200 / 37301 FlyBaseID:FBgn0034500 Length:355 Species:Drosophila melanogaster


Alignment Length:37 Identity:15/37 - (40%)
Similarity:19/37 - (51%) Gaps:3/37 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   633 DVLKEYPAARVRLEAI---AVKRLEKYKKAPLEKVAM 666
            |..||..|.|.|.|||   ..:|.||::|...|:..|
  Fly    21 DKEKEEEAERERQEAIREAEERRKEKHRKMEEEREKM 57

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865
CG11200NP_611471.1 Rossmann-fold NAD(P)(+)-binding proteins 67..338 CDD:473865
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.