DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2064 and Rdh13

DIOPT Version :9

Sequence 1:NP_610310.2 Gene:CG2064 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001101938.1 Gene:Rdh13 / 361504 RGDID:1304959 Length:334 Species:Rattus norvegicus


Alignment Length:317 Identity:166/317 - (52%)
Similarity:211/317 - (66%) Gaps:2/317 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSPLIMWPATIGVGIYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLA 73
            |.|:.:....|| |...||:|:.||.........|:..|||||||||||:||||:|:|||.:.||
  Rat     5 LLPVSVVGTVIG-GTVLLKDYVAGGACPSKATIPGRTVIVTGANTGIGKQTALELAKRGGNIILA 68

  Fly    74 CRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKT 138
            |||..:||.|.|||..||.|..:.:..|||:||.|||:|.....||:.::.:|:|||.|||||..
  Rat    69 CRDREKCEAAAKDIRGETLNPRVRAEHLDLASLKSIREFAGKIIKEEERVDILVNNAAVMRCPHW 133

  Fly   139 LTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSE-KSYDEGL 202
            .|:||:|:|.||||:|||||||||||.||.||||||:.:|||||..|.|:..|||.: |.||...
  Rat   134 TTEDGFEMQFGVNHLGHFLLTNLLLDKLKASAPSRIINLSSLAHVAGHIDFEDLNWQIKKYDTKA 198

  Fly   203 AYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLKT 267
            ||.|||||.||||:||::||:|:|||||||||||..|||.|:.....:....|.|.|..|.|.|:
  Rat   199 AYCQSKLAVVLFTKELSRRLQGTGVTVNALHPGVARTELGRHTGMHNSAFSGFMLGPFFWLLFKS 263

  Fly   268 PKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTGLD 324
            |:..||.|.|.|:..||:::||.||...:.|..:..|.|::||:.||.||....|||
  Rat   264 PQLAAQPSTYLAVAEELESVSGKYFDGLREKAPSPEAEDEEVARRLWTESAHLVGLD 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2064NP_610310.2 PRK06197 40..322 CDD:235737 153/282 (54%)
NADB_Rossmann 43..317 CDD:304358 151/274 (55%)
Rdh13NP_001101938.1 NADB_Rossmann 38..313 CDD:419666 151/274 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2082
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 312 1.000 Inparanoid score I2503
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.780

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