DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and CG15629

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_608859.1 Gene:CG15629 / 33679 FlyBaseID:FBgn0031630 Length:325 Species:Drosophila melanogaster


Alignment Length:259 Identity:56/259 - (21%)
Similarity:107/259 - (41%) Gaps:46/259 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IYFLKEYMQGG----KFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNR-CEK 82
            :|::.|.:...    :|.|..|.:|:|.::||...|:|:..||..||....:.:  .|:|: ..|
  Fly    32 VYYVLESIYYSLLPQRFRKLKDISGQVVLITGGGGGVGRLIALNFARLQARIVI--WDINQEAIK 94

  Fly    83 ARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQ 147
            ...|::.:....|.....:|:|..:.|.:......:|...:.:||||||::.|     |..:||.
  Fly    95 TTVDLLAKHGYDNCKGYVVDISDREQIYQRASQVTEEVGPVDILINNAGIVCC-----KPFWELH 154

  Fly   148 -------LGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYS 205
                   ..:|.|.|:......|..:..:....||.|.|:....|:...:|            |:
  Fly   155 DRVIQNTYNINIISHYWTVKAFLPHMMRNNRGHIVTVGSVTGMLGTYGCSD------------YA 207

  Fly   206 QSKLANVLFTRELAKRLEGSG---VTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWPLLK 266
            .:|.|.:.|...|...|:..|   :.::.:.|..::|.:...            ::|.:.|:|:
  Fly   208 ATKYACIGFHESLLTDLKAHGYDQIQMSLICPYYINTGMFSG------------VRPRMMPMLE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 51/235 (22%)
CG15629NP_608859.1 17beta-HSDXI-like_SDR_c 58..298 CDD:187598 50/233 (21%)

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