DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and HSD11B2

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_000187.3 Gene:HSD11B2 / 3291 HGNCID:5209 Length:405 Species:Homo sapiens


Alignment Length:369 Identity:88/369 - (23%)
Similarity:129/369 - (34%) Gaps:103/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IDCLLSPLIMWPATIGV----GIYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIAR 65
            :|.|...|:..||.:.|    |...|....:..:....|    :..::||.::|.|||||.::..
Human    44 LDWLCQRLLPPPAALAVLAAAGWIALSRLARPQRLPVAT----RAVLITGCDSGFGKETAKKLDS 104

  Fly    66 RGGTVYLACRDMN--------RCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPK 122
            .|.||.....::|        .|...|..::           ::||:....|.:.:     |..|
Human   105 MGFTVLATVLELNSPGAIELRTCCSPRLRLL-----------QMDLTKPGDISRVL-----EFTK 153

  Fly   123 LHV-------LINNAG---VMRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVV 177
            .|.       |:||||   |:...:......:...:.||..|...||..||.:|::|. .|||.|
Human   154 AHTTSTGLWGLVNNAGHNEVVADAELSPVATFRSCMEVNFFGALELTKGLLPLLRSSR-GRIVTV 217

  Fly   178 SSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELA 242
            .|.|   |.:....|.         ||..||.|..|.....:..|...||.|:.:.||...||..
Human   218 GSPA---GDMPYPCLG---------AYGTSKAAVALLMDTFSCELLPWGVKVSIIQPGCFKTESV 270

  Fly   243 RN---W--------AFFQTNLVKFFLKPMIWPL-------LK------TPKSGAQTSIYAALDPE 283
            ||   |        |.....|::.:.|..|..|       |:      ||...|.|....|..|.
Human   271 RNVGQWEKRKQLLLANLPQELLQAYGKDYIEHLHGQFLHSLRLAMSDLTPVVDAITDALLAARPR 335

  Fly   284 LKNISG-----LYF-------------------SDCKPKPVASG 303
            .:...|     :||                   |.|.|:.:..|
Human   336 RRYYPGQGLGLMYFIHYYLPEGLRRRFLQAFFISHCLPRALQPG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 79/327 (24%)
HSD11B2NP_000187.3 type2_17beta_HSD-like_SDR_c 83..363 CDD:187665 75/308 (24%)
Essential for protein stability 335..339 0/3 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..405 1/3 (33%)

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