DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and CG7322

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_573333.2 Gene:CG7322 / 32880 FlyBaseID:FBgn0030968 Length:242 Species:Drosophila melanogaster


Alignment Length:211 Identity:70/211 - (33%)
Similarity:105/211 - (49%) Gaps:26/211 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 TDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDL 103
            ||..|||.:||||..|||:....::|..|.||....|...:.::     :...:..:|...:|||
  Fly     3 TDLAGKVILVTGAGAGIGQALVKQLASAGATVIAVARKPEQLQQ-----LVAFDPVHIQPLQLDL 62

  Fly   104 SSLDSIRKFVDGFKKEQPKLHVLINNAGV--MRCPKTLTKDGYELQLGVNHIGHFLLTNLLLDVL 166
            |...::|   :|..| .|.|..|:|||||  ::..:.||:..::....||....|.:|..||..|
  Fly    63 SGWQAVR---EGLAK-VPLLDGLVNNAGVAIIKPFEELTEQDFDTHFDVNIKAVFNVTQSLLPRL 123

  Fly   167 KNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSGVTVNA 231
            |:.|  .||.|||:|            |.:|:....|||.:|.|....|:.||..|....:.||:
  Fly   124 KDGA--SIVNVSSIA------------SSRSFGGHTAYSATKAALDSLTKSLALELGPRKIRVNS 174

  Fly   232 LHPGVVDTEL-ARNWA 246
            ::|.||.|:: |.||:
  Fly   175 VNPTVVLTKMGADNWS 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 68/207 (33%)
CG7322NP_573333.2 XR_like_SDR_c 1..242 CDD:187609 70/211 (33%)

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