Protein Alignment Rdh1 and scu

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_523396.1
• Gene: scu / 32789
• FlyBaseID: FBgn0021765
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 64/264 - (24%)
• Similarity: 116/264 - (43%)
• Gaps: 39/264 - (14%)

  Fly    45 VFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSI 109
            |.:|||..:|:|:.||..:|::|.:|.||....::    ..::.||..::.:|. .:|::|...:
  Fly     6 VSLVTGGASGLGRATAERLAKQGASVILADLPSSK----GNEVAKELGDKVVFV-PVDVTSEKDV 65

  Fly   110 RKFVDGFKKEQPKLHVLINNAGVMRCPKTLT--------KDGYELQLGVNHIGHFLLTNLLLDVL 166
            ...:...|.:..:|.:.:|.||.....||..        .:.::..:.:|.:|.|.:..|...::
  Fly    66 SAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSAGLM 130

  Fly   167 KNSAPSR------IVVVSSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGS 225
            ..:.|::      ||..:|:|...|.|..|            |||.||.|.|..|..:|:.|...
  Fly   131 GANEPNQDGQRGVIVNTASVAAFDGQIGQA------------AYSASKAAVVGMTLPIARDLSTQ 183

  Fly   226 GVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIWP-LLKTPKSGAQ--TSIY--AALDPELK 285
            |:.:..:.||:.:|.:.   |.....:..|..|.:.:| .|..|...|.  .:||  ..|:.|:.
  Fly   184 GIRICTIAPGLFNTPML---AALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLLNGEVI 245

  Fly   286 NISG 289
            .|.|
  Fly   246 RIDG 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	64/264 (24%)
scu	NP_523396.1	HSD10-like_SDR_c	3..255	CDD:187629	64/264 (24%)