DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and CG31810

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_724023.1 Gene:CG31810 / 318955 FlyBaseID:FBgn0051810 Length:324 Species:Drosophila melanogaster


Alignment Length:213 Identity:50/213 - (23%)
Similarity:100/213 - (46%) Gaps:33/213 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQ-NI------- 96
            ::.|...:||||..|||||.|.|:||:|..:.|    ::|.|:....:..|..:| |:       
  Fly    53 EKFGNWAVVTGATDGIGKEYARELARQGLNLVL----VSRKEEKLIAVTNEIGSQYNVKIKWIVA 113

  Fly    97 -FSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGHFLLTN 160
             |::..::.:  .|.|.::|.     ::.:|:||.|.:..|::|.|           :...:|.:
  Fly   114 DFAKGREVYA--HIEKELNGI-----EVGILVNNVGTIHDPESLDK-----------VSEDMLWD 160

  Fly   161 LL-LDVLKNSAPSRIVVVSSLAHARGSI-NVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLE 223
            || ::|...:..:|.::...::..:|:| |:...:..:.:....||:.:|.....||:.|...:.
  Fly   161 LLTVNVGSVTMLTRKILPQMISRRKGAIVNLGSSSELQPHPNLTAYAATKKFVTHFTKGLEYEVA 225

  Fly   224 GSGVTVNALHPGVVDTEL 241
            ...:.|..:.|..|.|.:
  Fly   226 EHNIHVQLVMPAFVATNM 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 50/210 (24%)
CG31810NP_724023.1 17beta-HSD1_like_SDR_c 56..297 CDD:187614 50/210 (24%)

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