Protein Alignment Rdh1 and sni

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_572466.1
• Gene: sni / 31761
• FlyBaseID: FBgn0030026
• Length: 247
• Species: Drosophila melanogaster
• Alignment Length: 218
• Identity: 62/218 - (28%)
• Similarity: 100/218 - (45%)
• Gaps: 39/218 - (17%)

  Fly    47 IVTGANTGIG---KETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDS 108
            ::||.|.|:|   .:..|.:.:....::..||:..:. |..:|:.|  |:.||...|:||.:.|:
  Fly     5 LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAK--NHSNIHILEIDLRNFDA 66

  Fly   109 IRKFV---DGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQ-----LGVNHIGHFLLTNLLLDV 165
            ..|.|   :|..|:| .|:||.||||:  .||:........|     |..|.:...:|....|.:
  Fly    67 YDKLVADIEGVTKDQ-GLNVLFNNAGI--APKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL 128

  Fly   166 LKNSAPSR-----------IVVVSSLAHARGSINVADLNSEKSYDEGL-AYSQSKLANVLFTREL 218
            ||.:|.:.           |:.:||:.   |||       :.:.|.|: ||..||.|....|:.|
  Fly   129 LKKAAKANESQPMGVGRAAIINMSSIL---GSI-------QGNTDGGMYAYRTSKSALNAATKSL 183

  Fly   219 AKRLEGSGVTVNALHPGVVDTEL 241
            :..|....:...:||||.|.|::
  Fly   184 SVDLYPQRIMCVSLHPGWVKTDM 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	62/218 (28%)
sni	NP_572466.1	carb_red_sniffer_like_SDR_c	4..247	CDD:187586	62/218 (28%)