Protein Alignment Rdh1 and pbr1

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_593786.2
• Gene: pbr1 / 2542391
• PomBaseID: SPAC19A8.06
• Length: 376
• Species: Schizosaccharomyces pombe
• Alignment Length: 350
• Identity: 94/350 - (26%)
• Similarity: 152/350 - (43%)
• Gaps: 52/350 - (14%)

  Fly    17 ATIGVG-IYFLKEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACR---DM 77
            |.|.|. |...|.:..|...|.:....|.|.:|||.::|||:....::|..|..|.:..|   |.
pombe    27 AAIAVSTIAAFKFWTSGRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVILLRTEPDQ 91

  Fly    78 NRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQP--KLHVLINNAGVMRCP---K 137
            ...:.. .|:.|.|.||.|::...||||:.|:|||...:....|  :|.:::..:||:..|   :
pombe    92 FTVDYI-MDLRKRTKNQLIYTEVCDLSSMLSVRKFATKWIDCTPIRRLDMIVLCSGVLLPPFMDR 155

  Fly   138 TLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPS----RIVVVSSLAHARGSINVADLN-SEKS 197
            ..|::|.|||...|.:|.:.|..:|..|:... |.    |||..:..::..|:|:..||: |...
pombe   156 QTTEEGVELQWATNFLGPYQLLRILRPVIYGQ-PGHREVRIVAATCSSYILGNIDFNDLDLSNHP 219

  Fly   198 YDEGLAY---SQSKLANVLFTRELAKRLEG----SGVTVNALH-----PGVVDT-------ELAR 243
            |.....:   ..:|||.:.:..:..|:.|.    ..:..| ||     ||||.|       ...:
pombe   220 YPRKSPWKVVGNAKLALMTYLYDFQKKAEAHERPDKMPCN-LHTIMANPGVVRTPGFRRVVSFGK 283

  Fly   244 NWAFFQTNLVKFFLKPMIWPLLKTPKSGAQTSIYAALDPELKNIS-GLYFSDC-----KPKPVAS 302
            .|..|    :...|.|..|.|||....|||:..:|...||..:|: .:..::|     ..|.:..
pombe   284 VWGLF----LYLLLWPFWWLLLKGTIHGAQSFFHAICSPEFASITQPVLVNECSIVEYSRKEITD 344

  Fly   303 GALDDKVAKFLWAESEKWTGLDKLE 327
            ....:|:.|...|:      :|::|
pombe   345 PEFAEKLIKAADAQ------IDEVE 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	85/311 (27%)
pbr1	NP_593786.2	retinol-DH_like_SDR_c_like	54..351	CDD:212492	82/303 (27%)