DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and Hsd17b13

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_932147.2 Gene:Hsd17b13 / 243168 MGIID:2140804 Length:304 Species:Mus musculus


Alignment Length:307 Identity:82/307 - (26%)
Similarity:127/307 - (41%) Gaps:65/307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IGVGIYFLKEYMQGGKF---TKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNR- 79
            :||.||...|.:.  ||   .:....||:..::|||..|||:.||.|.|::...:.|  .|:|: 
Mouse    11 VGVIIYSYLESLV--KFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQKSRLVL--WDINKR 71

  Fly    80 -----CEKARK--DIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPK 137
                 .:|.||  .::      ::|  .:|.|:...|...||..|:|...:.:::||||.:....
Mouse    72 GVEETADKCRKLGAVV------HVF--VVDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPAD 128

  Fly   138 TLTKDGYEL--QLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDE 200
            .|:....|:  ...||.:|||.:...||..:.......||.|:|:. ..|.|...          
Mouse   129 LLSAKDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVC-GHGVIPYL---------- 182

  Fly   201 GLAYSQSKLANVLFTRELAKRLE---GSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIW 262
             :.|..||.|.|.|.|.|...|:   .:|:..:.|.|..|:|...:|            ....:|
Mouse   183 -IPYCSSKFAAVGFHRALTAELDTLGKTGIQTSCLCPVFVNTGFTKN------------PSTRLW 234

  Fly   263 PLLKTPKSGAQTSIYAALD-------PELKNIS-----GLYFSDCKP 297
            |:|: |:..|::.|...|.       |...|||     |..||...|
Mouse   235 PVLE-PEEVARSLINGILTNKKMIFVPSYINISLILEKGPGFSSKHP 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 74/280 (26%)
Hsd17b13NP_932147.2 17beta-HSDXI-like_SDR_c 38..269 CDD:187598 69/265 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..304 2/5 (40%)

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