DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and T01G6.10

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_503224.2 Gene:T01G6.10 / 187966 WormBaseID:WBGene00020154 Length:275 Species:Caenorhabditis elegans


Alignment Length:209 Identity:58/209 - (27%)
Similarity:100/209 - (47%) Gaps:33/209 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNN-QNIFSRELDLSS 105
            :||..||||:::|||:.||:..|:.|..|.:..||..:.|..:|.::|...| :|:.....:|:.
 Worm     5 SGKSVIVTGSSSGIGRATAVLFAKYGAQVTITGRDAGKLEATKKKMLKVMKNPENVCVVVANLTD 69

  Fly   106 LDS----IRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDG----YELQLGVNHIGHFLLTNLL 162
            .|.    ::..:|.|    .::.||:||||......|...|.    |.....:|.       ..:
 Worm    70 SDGQDEIVQSALDAF----GRIDVLVNNAGANVVDGTFNTDQSTELYHKTFQINF-------EAV 123

  Fly   163 LDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLA----YSQSKLANVLFTRELAKRLE 223
            ::::|.:.       :.|..::|.|  .:::|..:..:.||    |:.||.|...:||.:|..|.
 Worm   124 IEMVKKTK-------NHLIESKGEI--VNVSSVAAGPQALAPSPYYAASKAALDQYTRCVALDLI 179

  Fly   224 GSGVTVNALHPGVV 237
            ..||.||::.||||
 Worm   180 LQGVRVNSVSPGVV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 58/208 (28%)
T01G6.10NP_503224.2 Rossmann-fold NAD(P)(+)-binding proteins 4..263 CDD:473865 58/209 (28%)

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