DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and dhsl-4

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_503751.1 Gene:dhsl-4 / 187608 WormBaseID:WBGene00019885 Length:280 Species:Caenorhabditis elegans


Alignment Length:129 Identity:26/129 - (20%)
Similarity:51/129 - (39%) Gaps:32/129 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 CNGADRYIFGRRSGC----STTSRKSNGRRWSFVFDPAGRLCYYWSMVVSMAFLYN----FWVII 240
            |:..||.:......|    :...:|::.:.|.::.:.. .|| .|::::.:.:|.|    :|   
 Worm   173 CHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYICEET-TLC-IWTLIMYVDYLSNVAKPWW--- 232

  Fly   241 YRFAFQEINGESIVLWFCLDYFSDFLYLVDILFHFRTGYLEDGVLQTDST-----KLRQHYMNS 299
                    ....|:|...:...|....|:.::||   .||   :|...||     :.|..||.:
 Worm   233 --------KNAIIILLLVILAISLIFVLLLLIFH---SYL---ILTNQSTYELVRRRRIPYMRN 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 26/129 (20%)
dhsl-4NP_503751.1 SDR_c11 4..265 CDD:187622 21/110 (19%)

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