DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and F26D2.15

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_507157.1 Gene:F26D2.15 / 184969 WormBaseID:WBGene00009153 Length:279 Species:Caenorhabditis elegans


Alignment Length:240 Identity:58/240 - (24%)
Similarity:89/240 - (37%) Gaps:73/240 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKE-TNNQNIFSRELDLSS 105
            :|||.::||::.|||:..|:..|::|..|.:..|:..|.::.|.:|.|. ...:||.:...|:.:
 Worm     5 SGKVALITGSSNGIGRAAAILFAQQGAKVTITGRNAERLKETRHEIKKSGIPAENILAIVADVIT 69

  Fly   106 --------LDSIRKFVDGFKKEQPKLHVLINNAG-------------------------VMRCPK 137
                    .|::|||        ..|.:|:||||                         .||...
 Worm    70 DEGQMRLINDTVRKF--------GHLDILVNNAGGALMDAQGRVGMDQDISVFDNTMQINMRSVV 126

  Fly   138 TLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGL 202
            ||.:...|         |.:           .:...|:.||::|.......:|..          
 Worm   127 TLVQKAKE---------HLI-----------KSKGEIINVSAMAAGHHGDPIATF---------- 161

  Fly   203 AYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAF 247
             |..||.|...|||..|..|...||.||::.||...|.......|
 Worm   162 -YGMSKAALDQFTRSSAISLIQHGVRVNSVSPGFTKTGFGEAMGF 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 58/239 (24%)
F26D2.15NP_507157.1 Rossmann-fold NAD(P)(+)-binding proteins 4..265 CDD:473865 58/240 (24%)

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