DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and LOC1269657

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:XP_308302.5 Gene:LOC1269657 / 1269657 VectorBaseID:AGAMI1_009466 Length:318 Species:Anopheles gambiae


Alignment Length:323 Identity:181/323 - (56%)
Similarity:231/323 - (71%) Gaps:15/323 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLSPLIMWPATIGVGIYFL-KEYMQGGKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVY 71
            |||.||  .||:.|..|.| :..::||:|.|.|...|||.::||||||||||||.|:.:|||.||
Mosquito     2 LLSILI--GATVAVLTYKLARLIIEGGQFRKGTRCDGKVILITGANTGIGKETARELLKRGGKVY 64

  Fly    72 LACRDMNRCEKARKDIIKETNNQNIFSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCP 136
            :|||.:.|..:||.|||.:|...:|..|||||:||:|:|||..||.:|:.:|.:||||||||.||
Mosquito    65 IACRSLERGNEARSDIIAQTGLADIHVRELDLASLESVRKFAKGFLEEESRLDILINNAGVMACP 129

  Fly   137 KTLTKDGYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEG 201
            |.|||||:|.||||||:|||||||||||.||.|:|||||.:|||||..|.||..|||||.||::.
Mosquito   130 KALTKDGFEQQLGVNHLGHFLLTNLLLDRLKASSPSRIVNLSSLAHKYGKINRKDLNSEHSYNQV 194

  Fly   202 LAYSQSKLANVLFTRELAKRLEGSGVTVNALHPGVVDTELARNWAFFQTNLVKFFL------KPM 260
            .||.|||||||:|||||||||:|:|||..::|||.|||||.|:....      |||      ||:
Mosquito   195 TAYCQSKLANVMFTRELAKRLQGTGVTAYSVHPGTVDTELPRHMGSL------FFLFDHKLVKPL 253

  Fly   261 IWPLLKTPKSGAQTSIYAALDPELKNISGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTGL 323
            :....|||.|||||::|.|||.:|...||.|::||:.:.::..|.:|:::.:||.||.:.|.|
Mosquito   254 LRVAFKTPLSGAQTTLYTALDEDLAEESGKYYADCREQKLSKYARNDELSAWLWDESVRMTKL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 162/279 (58%)
LOC1269657XP_308302.5 None

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