Protein Alignment Rdh1 and Cbr3

DIOPT Version :10

• Sequence 1: NP_610310.2
• Gene: Rdh1 / 35708
• FlyBaseID: FBgn0033205
• Length: 330
• Species: Drosophila melanogaster
• Sequence 2: NP_766635.1
• Gene: Cbr3 / 109857
• MGIID: 1309992
• Length: 277
• Species: Mus musculus
• Alignment Length: 280
• Identity: 79/280 - (28%)
• Similarity: 119/280 - (42%)
• Gaps: 68/280 - (24%)

  Fly    44 KVFIVTGANTGIGKETALEIARR-GGTVYLACRDMNRCEKARKDIIKETNNQNIFSR--ELDLSS 105
            :|.:|||||.|||.....::.|: .|.|.|..||..|...|    :::...:.:..|  :||:..
Mouse     6 RVALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAA----VQQLQAEGLSPRFHQLDIDD 66

  Fly   106 LDSIRKFVDGFKKEQPKLHVLINNAGV---MRCPKTLTKDGYELQLGVNHIGHFLLT-NLLLDVL 166
            ..|||...|..:||...|:||:||||:   |..|..     :::|..|....:|..| |:..::|
Mouse    67 PQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTP-----FDIQAEVTLKTNFFATRNVCTELL 126

  Fly   167 KNSAP-SRIVVVSSLAHARGSIN--------------------------VADLNSEKSYDEG--- 201
            ....| .|:|.:|||...:...|                          |.|..:|....||
Mouse   127 PIMKPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTKNEVHEREGWPD 191

  Fly   202 LAYSQSKLANVLFTRELAKRLE----GSGVTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMIW 262
            .||..|||...:.||.||::|:    ...:.:||..||.|.|::||:..
Mouse   192 SAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQG---------------- 240

  Fly   263 PLLKTPKSGAQTSIYAALDP 282
              .:|.:.||:|.:|.||.|
Mouse   241 --SRTVEEGAETPVYLALLP 258

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rdh1	NP_610310.2	Rossmann-fold NAD(P)(+)-binding proteins	43..317	CDD:473865	79/280 (28%)
Cbr3	NP_766635.1	carb_red_PTCR-like_SDR_c	6..277	CDD:187585	79/280 (28%)