DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rdh1 and Rdh14

DIOPT Version :10

Sequence 1:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_076186.1 Gene:Rdh14 / 105014 MGIID:1920402 Length:334 Species:Mus musculus


Alignment Length:298 Identity:149/298 - (50%)
Similarity:196/298 - (65%) Gaps:22/298 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKE-----------TNNQNI 96
            ||..::||||:|:|:.||.|:.|.|..|.:.|||..|.|:|...:.:|           |:.| :
Mouse    44 GKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQ-L 107

  Fly    97 FSRELDLSSLDSIRKFVDGFKKEQPKLHVLINNAGVMRCPKTLTKDGYELQLGVNHIGHFLLTNL 161
            ..:||||:||.|:|.|.....:|:|:|.||||||||..||.|.|:||:|:|.||||:||||||||
Mouse   108 VVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHFLLTNL 172

  Fly   162 LLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYSQSKLANVLFTRELAKRLEGSG 226
            ||.:||:|||||||||||..:..|.||..|||||:||::...||:|||||:|||||||:||||:.
Mouse   173 LLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTN 237

  Fly   227 VTVNALHPGVVDTELARNWAFFQTNLVKFFLKPMI----WPLLKTPKSGAQTSIYAALDPELKNI 287
            ||||.||||:|.|.|.|:..      :....:|:.    |...|||..|||||||.|..|:::.:
Mouse   238 VTVNVLHPGIVRTNLGRHIH------IPLLARPLFNLVSWAFFKTPLEGAQTSIYLACSPDVEGV 296

  Fly   288 SGLYFSDCKPKPVASGALDDKVAKFLWAESEKWTGLDK 325
            ||.||.|||.:.:...|:|:.||:.||..||...|:.|
Mouse   297 SGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGILK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 145/288 (50%)
Rdh14NP_076186.1 Rossmann-fold NAD(P)(+)-binding proteins 44..326 CDD:473865 145/288 (50%)

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