DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2065 and LOC500227

DIOPT Version :9

Sequence 1:NP_001260787.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:XP_038964083.1 Gene:LOC500227 / 500227 RGDID:1566019 Length:598 Species:Rattus norvegicus


Alignment Length:43 Identity:10/43 - (23%)
Similarity:17/43 - (39%) Gaps:17/43 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 LHPGAVD--------------TELSRNWKFLKHPFAQLLLKPL 231
            |.||.::              :.|.|:|   ..|.|::|:..|
  Rat   317 LQPGGMERRPSHKTPTMRLDPSRLPRHW---VRPVAEVLIPDL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_001260787.1 PRK06197 11..294 CDD:235737 10/43 (23%)
NADB_Rossmann 14..288 CDD:304358 10/43 (23%)
LOC500227XP_038964083.1 DUF4639 8..571 CDD:406041 10/43 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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