DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2065 and rdh14a

DIOPT Version :9

Sequence 1:NP_001260787.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001006031.1 Gene:rdh14a / 450010 ZFINID:ZDB-GENE-041010-124 Length:286 Species:Danio rerio


Alignment Length:289 Identity:139/289 - (48%)
Similarity:189/289 - (65%) Gaps:12/289 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 GKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQ--NIFSRELDLSS 76
            ||..||||||:||||.|..|:.:|...|.|||||..|.|||.|:|.:|...:  .:..:.|||:|
Zfish     4 GKTVIVTGANSGIGKATTTELLRRQARVIMACRDRERAEKAAQEIKQEAGPEQGELVIKLLDLAS 68

  Fly    77 LESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTA 141
            |:|:|.|..|..||:.::.:||||||:..||.|.::||||||..|||:||||||:||||:||.:|
Zfish    69 LKSVRVFCEGIIKEEPRIDILINNAGIYQCPYTKSEDGFEMQFAVNHLGHFLLTNLLLDLLKCSA 133

  Fly   142 PSRIVNVSSLVHTQGFIKTADLNSEKSYSRIGAYSQSKLANVLFTRELAKRLEGTGVTTNSLHPG 206
            ||||:.|||.::..|.|...|||||:||.:..:|::|||||:|||.||:.:|:.||||.|:|.||
Zfish   134 PSRIIVVSSKLYKYGEINFDDLNSEQSYDKAFSYARSKLANLLFTLELSHKLKETGVTVNALTPG 198

  Fly   207 AVDTELSRNWKFLKHPFAQLLLKPLL----WVLFKTPRNGAQTTLYAALDPALKDVSGLYFSDCQ 267
            .|.|.|.|      |....||:|||.    ...||:|..||||::|.|....::.|.|..|:||:
Zfish   199 IVRTNLGR------HVHIPLLVKPLFNLASRAFFKSPEEGAQTSVYLACSEDVEGVQGKCFADCK 257

  Fly   268 PKEVSAAAQDDKTGKFLWAESEKWTGVNS 296
            .:::.|.|.|::..|.||..||...|:.:
Zfish   258 EEQLLAKATDEEVAKKLWDISEVMVGITT 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_001260787.1 PRK06197 11..294 CDD:235737 138/285 (48%)
NADB_Rossmann 14..288 CDD:304358 136/279 (49%)
rdh14aNP_001006031.1 PRK06197 4..285 CDD:235737 139/286 (49%)
NADB_Rossmann 4..278 CDD:304358 136/279 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100091
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.760

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