DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2065 and rdh12

DIOPT Version :10

Sequence 1:NP_610309.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001002325.2 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:320 Species:Danio rerio


Alignment Length:292 Identity:145/292 - (49%)
Similarity:194/292 - (66%) Gaps:6/292 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GGQFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQNI 67
            ||.........|||.:|||||:||||||.|::|.||..|.:||||:.:.|:|..:|........:
Zfish    32 GGSCRSTVRLDGKVALVTGANSGIGKETALDLASRGARVILACRDLEKAEEAAAEIRTRVGGAKV 96

  Fly    68 FSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHL 132
            ..|||||:...|||.||..|.:|.|.||:||||||||.||...|.||||||:||||:||:|||:|
Zfish    97 EVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMMCPYMKTADGFEMQIGVNHLGHYLLTYL 161

  Fly   133 LLDVLKKTAPSRIVNVSSLVHTQGFIKTADLNSEKSYSRIGAYSQSKLANVLFTRELAKRLEGTG 197
            |:.:||::||||||.||||.|..|:|:..||:|:.||:...||.||||||||||||||:||:|:.
Zfish   162 LIGLLKRSAPSRIVVVSSLAHNFGWIRFHDLHSQGSYNSGLAYCQSKLANVLFTRELARRLQGSN 226

  Fly   198 VTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVLFKTPRNGAQTTLYAALDPALKDVSGLY 262
            ||.||:|||.|.:||      ::|.....||.....:..|:|:.||||::|.|:...|:.:||.:
Zfish   227 VTVNSVHPGTVRSEL------VRHSTLMSLLFAFFSMFLKSPKEGAQTSIYCAVAEELQSISGKH 285

  Fly   263 FSDCQPKEVSAAAQDDKTGKFLWAESEKWTGV 294
            ||||.|..|:...:.::|.:.||..|.:..|:
Zfish   286 FSDCAPAFVAPQGRSEETARKLWDVSCELLGI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_610309.1 Rossmann-fold NAD(P)(+)-binding proteins 14..288 CDD:473865 141/273 (52%)
rdh12NP_001002325.2 Rossmann-fold NAD(P)(+)-binding proteins 43..311 CDD:473865 141/273 (52%)

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