DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2065 and rdh12

DIOPT Version :9

Sequence 1:NP_001260787.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001002325.1 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:319 Species:Danio rerio


Alignment Length:292 Identity:145/292 - (49%)
Similarity:194/292 - (66%) Gaps:6/292 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GGQFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQNI 67
            ||.........|||.:|||||:||||||.|::|.||..|.:||||:.:.|:|..:|........:
Zfish    31 GGSCRSTVRLDGKVALVTGANSGIGKETALDLASRGARVILACRDLEKAEEAAAEIRTRVGGAKV 95

  Fly    68 FSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHL 132
            ..|||||:...|||.||..|.:|.|.||:||||||||.||...|.||||||:||||:||:|||:|
Zfish    96 EVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMMCPYMKTADGFEMQIGVNHLGHYLLTYL 160

  Fly   133 LLDVLKKTAPSRIVNVSSLVHTQGFIKTADLNSEKSYSRIGAYSQSKLANVLFTRELAKRLEGTG 197
            |:.:||::||||||.||||.|..|:|:..||:|:.||:...||.||||||||||||||:||:|:.
Zfish   161 LIGLLKRSAPSRIVVVSSLAHNFGWIRFHDLHSQGSYNSGLAYCQSKLANVLFTRELARRLQGSN 225

  Fly   198 VTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVLFKTPRNGAQTTLYAALDPALKDVSGLY 262
            ||.||:|||.|.:||      ::|.....||.....:..|:|:.||||::|.|:...|:.:||.:
Zfish   226 VTVNSVHPGTVRSEL------VRHSTLMSLLFAFFSMFLKSPKEGAQTSIYCAVAEELQSISGKH 284

  Fly   263 FSDCQPKEVSAAAQDDKTGKFLWAESEKWTGV 294
            ||||.|..|:...:.::|.:.||..|.:..|:
Zfish   285 FSDCAPAFVAPQGRSEETARKLWDVSCELLGI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_001260787.1 PRK06197 11..294 CDD:235737 142/282 (50%)
NADB_Rossmann 14..288 CDD:304358 141/273 (52%)
rdh12NP_001002325.1 PRK06197 41..318 CDD:235737 143/282 (51%)
NADB_Rossmann 42..310 CDD:304358 141/273 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9897
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - mtm6476
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.820

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