DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2065 and cbr1

DIOPT Version :10

Sequence 1:NP_610309.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_919387.1 Gene:cbr1 / 373866 ZFINID:ZDB-GENE-030902-2 Length:276 Species:Danio rerio


Alignment Length:296 Identity:84/296 - (28%)
Similarity:126/296 - (42%) Gaps:67/296 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KVFIVTGANTGIGKETVLEIAKR-GGTVYMACRDMNRCEKARQDIIRETNNQNIFSRELDLSSLE 78
            ||.:|||||.|||...|..:.|. .|.||::.||:.| ..|..|.:::.....:| .:||::...
Zfish     5 KVALVTGANKGIGFAIVRALCKEYTGDVYLSSRDVGR-GTAAVDSLKKEGLHPLF-HQLDINDPN 67

  Fly    79 SIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLT----HLLLDVLKK 139
            |:|.....|:::...|.|||||||:.......|.  |..|..|....:|..|    ::.|.::| 
Zfish    68 SVRTARDFFQEKYGGLDVLINNAGIAFKMADTTP--FGTQADVTLKTNFFATRDMCNVFLPIIK- 129

  Fly   140 TAPSRIVNVSSLVHT----------------------------QGFIKTAD--LNSEKSYSRIGA 174
             ...|:|||||.:.:                            :.|::.|.  ::||:.:... |
Zfish   130 -PGGRLVNVSSGMGSMALGRCSPELQARFRSDDITEEELNGLMERFVREAQEGVHSERGWPST-A 192

  Fly   175 YSQSKLANVLFT----RELAKRLEGTGVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVL 235
            |..||......|    |.|.|...|.|:..|:..||.|.|:::       .|.|.          
Zfish   193 YGISKTGLTTLTRIQARNLTKERPGDGILCNACCPGWVRTDMA-------GPNAT---------- 240

  Fly   236 FKTPRNGAQTTLYAALDPA-LKDVSGLYFSD--CQP 268
             |:|..||.|.:|.||.|| .|:..|.:.|:  .||
Zfish   241 -KSPDEGAITPVYLALLPAGAKEPHGQFVSEMKVQP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_610309.1 Rossmann-fold NAD(P)(+)-binding proteins 14..288 CDD:473865 84/296 (28%)
cbr1NP_919387.1 carb_red_PTCR-like_SDR_c 5..276 CDD:187585 84/296 (28%)

Return to query results.
Submit another query.