DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2065 and pbr1

DIOPT Version :10

Sequence 1:NP_610309.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_593786.2 Gene:pbr1 / 2542391 PomBaseID:SPAC19A8.06 Length:376 Species:Schizosaccharomyces pombe


Alignment Length:333 Identity:85/333 - (25%)
Similarity:137/333 - (41%) Gaps:64/333 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GGQFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKAR------QDIIRE 61
            |...|.:....|.|.:|||.::|||:..|.::|..|..|.:    :.|.|..:      .|:.:.
pombe    43 GRTTTWERKMNGMVVMVTGGSSGIGQVVVEKLASLGAQVVI----LLRTEPDQFTVDYIMDLRKR 103

  Fly    62 TNNQNIFSRELDLSSLESIRKFAAGFKKEQD-----KLHVLINNAGVMHCP---RTLTKDGFEMQ 118
            |.||.|::...||||:.|:||||.   |..|     :|.:::..:||:..|   |..|::|.|:|
pombe   104 TKNQLIYTEVCDLSSMLSVRKFAT---KWIDCTPIRRLDMIVLCSGVLLPPFMDRQTTEEGVELQ 165

  Fly   119 LGVNHMGHFLLTHLLLDVLKKTAPSRIVNVSSLVHTQGFIKTADLN----SEKSYSRIGAY---S 176
            ...|.:|.:.|..:|..|:......|.|.:.:...:...:...|.|    |...|.|...:   .
pombe   166 WATNFLGPYQLLRILRPVIYGQPGHREVRIVAATCSSYILGNIDFNDLDLSNHPYPRKSPWKVVG 230

  Fly   177 QSKLANVLFTRELAKRLEG--------TGVTTNSLHPGAVDT-------ELSRNWKFLKHPFAQL 226
            .:|||.:.:..:..|:.|.        ..:.|...:||.|.|       ...:.|..    |..|
pombe   231 NAKLALMTYLYDFQKKAEAHERPDKMPCNLHTIMANPGVVRTPGFRRVVSFGKVWGL----FLYL 291

  Fly   227 LLKPLLWVLFKTPRNGAQTTLYAALDPALKDVS-GLYFSDCQPKEVS----------------AA 274
            ||.|..|:|.|...:|||:..:|...|....:: .:..::|...|.|                |.
pombe   292 LLWPFWWLLLKGTIHGAQSFFHAICSPEFASITQPVLVNECSIVEYSRKEITDPEFAEKLIKAAD 356

  Fly   275 AQDDKTGK 282
            ||.|:..|
pombe   357 AQIDEVEK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_610309.1 Rossmann-fold NAD(P)(+)-binding proteins 14..288 CDD:473865 83/322 (26%)
pbr1NP_593786.2 retinol-DH_like_SDR_c_like 54..351 CDD:212492 78/307 (25%)

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