DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2065 and Rdh11

DIOPT Version :9

Sequence 1:NP_001260787.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_067532.2 Gene:Rdh11 / 17252 MGIID:102581 Length:316 Species:Mus musculus


Alignment Length:289 Identity:152/289 - (52%)
Similarity:194/289 - (67%) Gaps:14/289 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQGGQFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQ 65
            :..|..|......|||.|||||||||||||..::|:||..||:||||:::.|.|.::|...|.|.
Mouse    25 LSSGVCTSNVQLPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELAAREIQAVTGNS 89

  Fly    66 NIFSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLT 130
            .:|.|:|||:..:|||.||..|..|:..||:||||||||.||.:.|.|||||.:||||:||||||
Mouse    90 QVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEMHIGVNHLGHFLLT 154

  Fly   131 HLLLDVLKKTAPSRIVNVSSLVHTQGFIKTADLNSEKSYSRIGAYSQSKLANVLFTRELAKRLEG 195
            ||||:.||::|||||||:|||.|..|.|...:|..||.||...||..|||||:|||:||||||:|
Mouse   155 HLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNLQGEKFYSAGLAYCHSKLANILFTKELAKRLKG 219

  Fly   196 TGVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVLF----KTPRNGAQTTLYAALDPALK 256
            :||||.|:|||.|.:||:|....::          .||.||    |||:.||||:||.||...|:
Mouse   220 SGVTTYSVHPGTVHSELTRYSSIMR----------WLWQLFFVFIKTPQEGAQTSLYCALTEGLE 274

  Fly   257 DVSGLYFSDCQPKEVSAAAQDDKTGKFLW 285
            .:||.:|||||...||...:::...:.||
Mouse   275 SLSGSHFSDCQLAWVSYQGRNEIIARRLW 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_001260787.1 PRK06197 11..294 CDD:235737 150/279 (54%)
NADB_Rossmann 14..288 CDD:304358 150/276 (54%)
Rdh11NP_067532.2 PRK06197 38..311 CDD:235737 150/276 (54%)
NADB_Rossmann 38..306 CDD:304358 150/276 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100724
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - mtm8848
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.820

Return to query results.
Submit another query.