back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG2065 and Cbr1

DIOPT Version :9

Sequence 1:	NP_001260787.1	Gene:	CG2065 / 35707	FlyBaseID:	FBgn0033204	Length:	300	Species:	Drosophila melanogaster
Sequence 2:	NP_031646.2	Gene:	Cbr1 / 12408	MGIID:	88284	Length:	277	Species:	Mus musculus

Alignment Length:	296	Identity:	80/296 - (27%)
Similarity:	123/296 - (41%)	Gaps:	68/296 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 VFIVTGANTGIGKETVLEIAKR-GGTVYMACRDMNRCEKARQDIIRETNNQNIFSRELDLSSLES 79
            |.:|||||.|||.....::.:: .|.|.:|.||..|.:.|.|.:..|..:...  .:||:.:.:|
Mouse     7 VALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRF--HQLDIDNPQS 69

  Fly    80 IRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHLLLDVLKKTAP-- 142
            ||.......||...|.||:||||:..  :......|.:|..|....:|..|.   ||.|:..|
Mouse    70 IRALRDFLLKEYGGLDVLVNNAGIAF--KVNDDTPFHIQAEVTMKTNFFGTR---DVCKELLPLI 129

  Fly   143 ---SRIVNVSSLVHTQGFIKTADLNSEKSY--------SRIG----------------------A 174
               .|:|||||:|..:. :|...|..::.:        ..:|                      |
Mouse   130 KPQGRVVNVSSMVSLRA-LKNCRLELQQKFRSETITEEELVGLMNKFVEDTKKGVHAEEGWPNSA 193

  Fly   175 YSQSKLANVLFTRELAKRL----EGTGVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVL 235
            |..:|:...:.:|.||::|    .|..:..|:..||.|.|:::       .|.|.
Mouse   194 YGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDMA-------GPKAT---------- 241

  Fly   236 FKTPRNGAQTTLYAALDPALKDVSGLYFSDCQPKEV 271
             |:|..||:|.:|.||.|  .|..|.:....|.|:|
Mouse   242 -KSPEEGAETPVYLALLP--PDAEGPHGQFVQDKKV 274

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.