DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2065 and RDH13

DIOPT Version :10

Sequence 1:NP_610309.1 Gene:CG2065 / 35707 FlyBaseID:FBgn0033204 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001139443.1 Gene:RDH13 / 112724 HGNCID:19978 Length:331 Species:Homo sapiens


Alignment Length:298 Identity:153/298 - (51%)
Similarity:203/298 - (68%) Gaps:1/298 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GGQFTKQTDETGKVFIVTGANTGIGKETVLEIAKRGGTVYMACRDMNRCEKARQDIIRETNNQNI 67
            ||....:....||..|||||||||||:|.||:|:|||.:.:|||||.:||.|.:||..||.|.::
Human    27 GGACPSKATIPGKTVIVTGANTGIGKQTALELARRGGNIILACRDMEKCEAAAKDIRGETLNHHV 91

  Fly    68 FSRELDLSSLESIRKFAAGFKKEQDKLHVLINNAGVMHCPRTLTKDGFEMQLGVNHMGHFLLTHL 132
            .:|.|||:||:|||:|||...:|::::.:||||||||.||...|:||||||.||||:||||||:|
Human    92 NARHLDLASLKSIREFAAKIIEEEERVDILINNAGVMRCPHWTTEDGFEMQFGVNHLGHFLLTNL 156

  Fly   133 LLDVLKKTAPSRIVNVSSLVHTQGFIKTADLN-SEKSYSRIGAYSQSKLANVLFTRELAKRLEGT 196
            |||.||.:|||||:|:|||.|..|.|...||| ..:.|:...||.|||||.||||:||::||:|:
Human   157 LLDKLKASAPSRIINLSSLAHVAGHIDFDDLNWQTRKYNTKAAYCQSKLAIVLFTKELSRRLQGS 221

  Fly   197 GVTTNSLHPGAVDTELSRNWKFLKHPFAQLLLKPLLWVLFKTPRNGAQTTLYAALDPALKDVSGL 261
            |||.|:||||...|||.|:.......|:...|.|:.|:|.|:|...||.:.|.|:...|.||||.
Human   222 GVTVNALHPGVARTELGRHTGIHGSTFSSTTLGPIFWLLVKSPELAAQPSTYLAVAEELADVSGK 286

  Fly   262 YFSDCQPKEVSAAAQDDKTGKFLWAESEKWTGVNSTKV 299
            ||...:.|..:..|:|::..:.|||||.:..|:.:..|
Human   287 YFDGLKQKAPAPEAEDEEVARRLWAESARLVGLEAPSV 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2065NP_610309.1 Rossmann-fold NAD(P)(+)-binding proteins 14..288 CDD:473865 147/274 (54%)
RDH13NP_001139443.1 retinol-DH_like_SDR_c 38..313 CDD:212495 147/274 (54%)

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