DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and rdh14

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001017231.1 Gene:rdh14 / 549985 XenbaseID:XB-GENE-1018384 Length:323 Species:Xenopus tropicalis


Alignment Length:330 Identity:155/330 - (46%)
Similarity:201/330 - (60%) Gaps:20/330 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAPTDYLFCPLAYGSALSAIGIYLLRQYMQ-GGQFTTKTNETGRVAIVTGCNQGIGKETVLELAR 65
            |:|...:...:|.|..|..:...||...:: ||....:    |:..|:||.|.||||.|..||.:
 Frog     4 SSPALMVAAAVALGGGLILVVRRLLSNSVRAGGSGLMR----GKTVIITGANCGIGKATAAELVK 64

  Fly    66 RGATVYMACRDMKKCENARREIIK-ATNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINN 129
            :.|.|.:||||..:.|.|..|:.: |.....|..:||||.|::|:|.|.....:|:.:|.:||||
 Frog    65 QEARVILACRDQGRAEEAAAELRREAGERGEIVIKQLDLGSLQSVRRFCQEVLKEEPRLDVLINN 129

  Fly   130 AGIMDCPKMLTEDGFEMQIGVNHMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNS 194
            ||:..||...||||||||.||||:||||||..||.:||||||||:||:||..:::|.|..|||||
 Frog   130 AGVFQCPYTKTEDGFEMQFGVNHLGHFLLTHHLLGLLKSSAPSRIVVVSSKLYKYGEINFDDLNS 194

  Fly   195 EKSYDRKMAYCQSKLANVLFTRELAKRLSGTGVTVNALHPGVVNTELFR--NTPFLGSWFGKLLI 257
            ||||.|...|.:|||||:|||||||.||.||||||||||||:|.|.|.|  |.|        :||
 Frog   195 EKSYSRSFGYSRSKLANILFTRELASRLEGTGVTVNALHPGIVRTNLGRHINIP--------ILI 251

  Fly   258 APII----WIFIKTARNGAQTTLYAALDPSLEKVSGRYFSDCKQKHVGSAAQYDDDAQFLWAESE 318
            .|:.    |.|.|:...||||::|.|..|.:|.|||.||.:.|::.:...|..|..|:.||..||
 Frog   252 KPLFNVVSWAFFKSPEEGAQTSIYLASSPEVEGVSGSYFGNSKEEELLPKAMDDLVARKLWDISE 316

  Fly   319 KWTGI 323
            ...|:
 Frog   317 VMVGL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 145/288 (50%)
NADB_Rossmann 43..317 CDD:304358 143/280 (51%)
rdh14NP_001017231.1 NADB_Rossmann 42..315 CDD:389744 143/280 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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