DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and rdh12

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001002325.1 Gene:rdh12 / 436597 ZFINID:ZDB-GENE-040718-9 Length:319 Species:Danio rerio


Alignment Length:318 Identity:155/318 - (48%)
Similarity:210/318 - (66%) Gaps:12/318 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAYGSALSAIGIYL------LRQYMQGGQFTTKTNETGRVAIVTGCNQGIGKETVLELARRGATV 70
            :|:.:.|..:.:.|      :|:|..||...:.....|:||:|||.|.||||||.|:||.|||.|
Zfish     5 VAFAAGLGLVALILRLLSPQIRKYAAGGSCRSTVRLDGKVALVTGANSGIGKETALDLASRGARV 69

  Fly    71 YMACRDMKKCENARREIIKATNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDC 135
            .:||||::|.|.|..||........:..|:|||....|||.||..|.||.:.|||||||||:|.|
Zfish    70 ILACRDLEKAEEAAAEIRTRVGGAKVEVRELDLADCCSIRAFAQRFLREVDHLHILINNAGVMMC 134

  Fly   136 PKMLTEDGFEMQIGVNHMGHFLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDR 200
            |.|.|.|||||||||||:||:|||.||:.:||.|||||:||:||:||.||.|:..||:|:.||:.
Zfish   135 PYMKTADGFEMQIGVNHLGHYLLTYLLIGLLKRSAPSRIVVVSSLAHNFGWIRFHDLHSQGSYNS 199

  Fly   201 KMAYCQSKLANVLFTRELAKRLSGTGVTVNALHPGVVNTELFRNTPFLGSWFGKLLIAPIIWIFI 265
            .:|||||||||||||||||:||.|:.||||::|||.|.:||.|::..:.      |:.....:|:
Zfish   200 GLAYCQSKLANVLFTRELARRLQGSNVTVNSVHPGTVRSELVRHSTLMS------LLFAFFSMFL 258

  Fly   266 KTARNGAQTTLYAALDPSLEKVSGRYFSDCKQKHVGSAAQYDDDAQFLWAESEKWTGI 323
            |:.:.||||::|.|:...|:.:||::||||....|....:.::.|:.||..|.:..||
Zfish   259 KSPKEGAQTSIYCAVAEELQSISGKHFSDCAPAFVAPQGRSEETARKLWDVSCELLGI 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 146/281 (52%)
NADB_Rossmann 43..317 CDD:304358 145/273 (53%)
rdh12NP_001002325.1 PRK06197 41..318 CDD:235737 148/282 (52%)
NADB_Rossmann 42..310 CDD:304358 145/273 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9897
eggNOG 1 0.900 - - E2759_KOG1208
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - mtm6476
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1905
SonicParanoid 1 1.000 - - X72
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.820

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