DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2070 and Rdh11

DIOPT Version :9

Sequence 1:NP_001260786.1 Gene:CG2070 / 35706 FlyBaseID:FBgn0033203 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001012193.1 Gene:Rdh11 / 362757 RGDID:1312001 Length:316 Species:Rattus norvegicus


Alignment Length:289 Identity:152/289 - (52%)
Similarity:193/289 - (66%) Gaps:6/289 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LRQYMQGGQFTTKTNETGRVAIVTGCNQGIGKETVLELARRGATVYMACRDMKKCENARREIIKA 90
            :|:.:..|..|:....:|:||||||.|.||||||..:||||||.||:|||||:|.|....||...
  Rat    21 IRKMLSCGVCTSNVQLSGKVAIVTGANTGIGKETAKDLARRGARVYLACRDMQKGELVASEIQAT 85

  Fly    91 TNNQNIFARQLDLCSMKSIRNFAAGFKREQNKLHILINNAGIMDCPKMLTEDGFEMQIGVNHMGH 155
            |.|..:..|:|||...||||.||.||..|:..|||||||||:|.||...|.|||||..||||:||
  Rat    86 TGNSQVLVRKLDLADTKSIRAFAEGFLAEEKYLHILINNAGVMMCPYSKTADGFEMHFGVNHLGH 150

  Fly   156 FLLTLLLLDVLKSSAPSRVVVLSSIAHRFGRIKRDDLNSEKSYDRKMAYCQSKLANVLFTRELAK 220
            ||||.|||:.||.|.|||||.:||:||..|||...:|:.||.|...:|||.|||||:|||:|||:
  Rat   151 FLLTHLLLEKLKESGPSRVVNVSSLAHHLGRIHFHNLHGEKFYSGGLAYCHSKLANILFTKELAR 215

  Fly   221 RLSGTGVTVNALHPGVVNTELFRNTPFLGSWFGKLLIAPIIWIFIKTARNGAQTTLYAALDPSLE 285
            ||.|:.||..::|||.|::||.|::..| .|..:|     .:.||||.:.||||:||.|:...:|
  Rat   216 RLKGSRVTTYSVHPGTVHSELIRHSTAL-KWLWQL-----FFFFIKTPQQGAQTSLYCAVTEGIE 274

  Fly   286 KVSGRYFSDCKQKHVGSAAQYDDDAQFLW 314
            .:||.:||||:...|.|.|..:..|:.||
  Rat   275 GLSGSHFSDCQLAWVSSQAGNETIARRLW 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2070NP_001260786.1 PRK06197 41..323 CDD:235737 149/274 (54%)
NADB_Rossmann 43..317 CDD:304358 149/272 (55%)
Rdh11NP_001012193.1 NADB_Rossmann 38..306 CDD:419666 149/272 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100724
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53570
OrthoDB 1 1.010 - - D414554at33208
OrthoFinder 1 1.000 - - FOG0000061
OrthoInspector 1 1.000 - - otm45462
orthoMCL 1 0.900 - - OOG6_100091
Panther 1 1.100 - - O PTHR24320
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X72
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.930

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